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Meta-analysis of genome-wide association studies reveals genetic overlap between Hodgkin lymphoma and multiple sclerosis
Background : Based on epidemiological commonalities, multiple sclerosis (MS) and Hodgkin lymphoma (HL), two clinically distinct conditions, have long been suspected to be aetiologically related. MS and HL occur in roughly the same age groups, both are associated with Epstein-Barr virus infection and...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5005944/ https://www.ncbi.nlm.nih.gov/pubmed/26971321 http://dx.doi.org/10.1093/ije/dyv364 |
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author | Khankhanian, Pouya Cozen, Wendy Himmelstein, Daniel S Madireddy, Lohith Din, Lennox van den Berg, Anke Matsushita, Takuya Glaser, Sally L Moré, Jayaji M Smedby, Karin E. Baranzini, Sergio E Mack, Thomas M Lizée, Antoine de Sanjosé, Silvia Gourraud, Pierre-Antoine Nieters, Alexandra Hauser, Stephen L Cocco, Pierluigi Maynadié, Marc Foretová, Lenka Staines, Anthony Delahaye-Sourdeix, Manon Li, Dalin Bhatia, Smita Melbye, Mads Onel, Kenan Jarrett, Ruth McKay, James D Oksenberg, Jorge R Hjalgrim, Henrik |
author_facet | Khankhanian, Pouya Cozen, Wendy Himmelstein, Daniel S Madireddy, Lohith Din, Lennox van den Berg, Anke Matsushita, Takuya Glaser, Sally L Moré, Jayaji M Smedby, Karin E. Baranzini, Sergio E Mack, Thomas M Lizée, Antoine de Sanjosé, Silvia Gourraud, Pierre-Antoine Nieters, Alexandra Hauser, Stephen L Cocco, Pierluigi Maynadié, Marc Foretová, Lenka Staines, Anthony Delahaye-Sourdeix, Manon Li, Dalin Bhatia, Smita Melbye, Mads Onel, Kenan Jarrett, Ruth McKay, James D Oksenberg, Jorge R Hjalgrim, Henrik |
author_sort | Khankhanian, Pouya |
collection | PubMed |
description | Background : Based on epidemiological commonalities, multiple sclerosis (MS) and Hodgkin lymphoma (HL), two clinically distinct conditions, have long been suspected to be aetiologically related. MS and HL occur in roughly the same age groups, both are associated with Epstein-Barr virus infection and ultraviolet (UV) light exposure, and they cluster mutually in families (though not in individuals). We speculated if in addition to sharing environmental risk factors, MS and HL were also genetically related. Using data from genome-wide association studies (GWAS) of 1816 HL patients, 9772 MS patients and 25 255 controls, we therefore investigated the genetic overlap between the two diseases. Methods: From among a common denominator of 404 K single nucleotide polymorphisms (SNPs) studied, we identified SNPs and human leukocyte antigen (HLA) alleles independently associated with both diseases. Next, we assessed the cumulative genome-wide effect of MS-associated SNPs on HL and of HL-associated SNPs on MS. To provide an interpretational frame of reference, we used data from published GWAS to create a genetic network of diseases within which we analysed proximity of HL and MS to autoimmune diseases and haematological and non-haematological malignancies. Results: SNP analyses revealed genome-wide overlap between HL and MS, most prominently in the HLA region. Polygenic HL risk scores explained 4.44% of HL risk (Nagelkerke R (2) ), but also 2.36% of MS risk. Conversely, polygenic MS risk scores explained 8.08% of MS risk and 1.94% of HL risk. In the genetic disease network, HL was closer to autoimmune diseases than to solid cancers. Conclusions: HL displays considerable genetic overlap with MS and other autoimmune diseases. |
format | Online Article Text |
id | pubmed-5005944 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-50059442016-09-06 Meta-analysis of genome-wide association studies reveals genetic overlap between Hodgkin lymphoma and multiple sclerosis Khankhanian, Pouya Cozen, Wendy Himmelstein, Daniel S Madireddy, Lohith Din, Lennox van den Berg, Anke Matsushita, Takuya Glaser, Sally L Moré, Jayaji M Smedby, Karin E. Baranzini, Sergio E Mack, Thomas M Lizée, Antoine de Sanjosé, Silvia Gourraud, Pierre-Antoine Nieters, Alexandra Hauser, Stephen L Cocco, Pierluigi Maynadié, Marc Foretová, Lenka Staines, Anthony Delahaye-Sourdeix, Manon Li, Dalin Bhatia, Smita Melbye, Mads Onel, Kenan Jarrett, Ruth McKay, James D Oksenberg, Jorge R Hjalgrim, Henrik Int J Epidemiol Neurological Disorders and Cancer Background : Based on epidemiological commonalities, multiple sclerosis (MS) and Hodgkin lymphoma (HL), two clinically distinct conditions, have long been suspected to be aetiologically related. MS and HL occur in roughly the same age groups, both are associated with Epstein-Barr virus infection and ultraviolet (UV) light exposure, and they cluster mutually in families (though not in individuals). We speculated if in addition to sharing environmental risk factors, MS and HL were also genetically related. Using data from genome-wide association studies (GWAS) of 1816 HL patients, 9772 MS patients and 25 255 controls, we therefore investigated the genetic overlap between the two diseases. Methods: From among a common denominator of 404 K single nucleotide polymorphisms (SNPs) studied, we identified SNPs and human leukocyte antigen (HLA) alleles independently associated with both diseases. Next, we assessed the cumulative genome-wide effect of MS-associated SNPs on HL and of HL-associated SNPs on MS. To provide an interpretational frame of reference, we used data from published GWAS to create a genetic network of diseases within which we analysed proximity of HL and MS to autoimmune diseases and haematological and non-haematological malignancies. Results: SNP analyses revealed genome-wide overlap between HL and MS, most prominently in the HLA region. Polygenic HL risk scores explained 4.44% of HL risk (Nagelkerke R (2) ), but also 2.36% of MS risk. Conversely, polygenic MS risk scores explained 8.08% of MS risk and 1.94% of HL risk. In the genetic disease network, HL was closer to autoimmune diseases than to solid cancers. Conclusions: HL displays considerable genetic overlap with MS and other autoimmune diseases. Oxford University Press 2016-06 2016-03-12 /pmc/articles/PMC5005944/ /pubmed/26971321 http://dx.doi.org/10.1093/ije/dyv364 Text en © The Author 2016. Published by Oxford University Press on behalf of the International Epidemiological Association. http://creativecommons.org/licenses/by-nc/4.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License ( http://creativecommons.org/licenses/by-nc/4.0/ ), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Neurological Disorders and Cancer Khankhanian, Pouya Cozen, Wendy Himmelstein, Daniel S Madireddy, Lohith Din, Lennox van den Berg, Anke Matsushita, Takuya Glaser, Sally L Moré, Jayaji M Smedby, Karin E. Baranzini, Sergio E Mack, Thomas M Lizée, Antoine de Sanjosé, Silvia Gourraud, Pierre-Antoine Nieters, Alexandra Hauser, Stephen L Cocco, Pierluigi Maynadié, Marc Foretová, Lenka Staines, Anthony Delahaye-Sourdeix, Manon Li, Dalin Bhatia, Smita Melbye, Mads Onel, Kenan Jarrett, Ruth McKay, James D Oksenberg, Jorge R Hjalgrim, Henrik Meta-analysis of genome-wide association studies reveals genetic overlap between Hodgkin lymphoma and multiple sclerosis |
title | Meta-analysis of genome-wide association studies reveals genetic overlap between Hodgkin lymphoma and multiple sclerosis |
title_full | Meta-analysis of genome-wide association studies reveals genetic overlap between Hodgkin lymphoma and multiple sclerosis |
title_fullStr | Meta-analysis of genome-wide association studies reveals genetic overlap between Hodgkin lymphoma and multiple sclerosis |
title_full_unstemmed | Meta-analysis of genome-wide association studies reveals genetic overlap between Hodgkin lymphoma and multiple sclerosis |
title_short | Meta-analysis of genome-wide association studies reveals genetic overlap between Hodgkin lymphoma and multiple sclerosis |
title_sort | meta-analysis of genome-wide association studies reveals genetic overlap between hodgkin lymphoma and multiple sclerosis |
topic | Neurological Disorders and Cancer |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5005944/ https://www.ncbi.nlm.nih.gov/pubmed/26971321 http://dx.doi.org/10.1093/ije/dyv364 |
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