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Data set of phylogenetic analysis inferred based on the complete genomes of the family Nodaviridae
In this article, nine complete genomes of viruses from the genus Alphanodavirus and Betanodavirus (Family Nodaviridae) were comparatively analyzed and the data of their evolutionary origins and relatedness are reported. The nucleotide sequence alignment of the complete genomes from all species and t...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5007544/ https://www.ncbi.nlm.nih.gov/pubmed/27617282 http://dx.doi.org/10.1016/j.dib.2016.08.025 |
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author | Low, Chen-Fei Bunawan, Hamidun |
author_facet | Low, Chen-Fei Bunawan, Hamidun |
author_sort | Low, Chen-Fei |
collection | PubMed |
description | In this article, nine complete genomes of viruses from the genus Alphanodavirus and Betanodavirus (Family Nodaviridae) were comparatively analyzed and the data of their evolutionary origins and relatedness are reported. The nucleotide sequence alignment of the complete genomes from all species and their deduced evolutionary relationships are presented. High sequence similarity within the genus Betanodavirus compared to the genus Alphanodavirus was revealed in multiple sequence alignment of the Nodaviridae genomes. The amino acid sequence similarity for both RNA1 and RNA2 ORF is more conserved in Betanodavirus, compared to Alphanodavirus. The conserved and variable regions within the virus genome that were defined based on the multiple sequence alignments are presented in this dataset. |
format | Online Article Text |
id | pubmed-5007544 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-50075442016-09-09 Data set of phylogenetic analysis inferred based on the complete genomes of the family Nodaviridae Low, Chen-Fei Bunawan, Hamidun Data Brief Data Article In this article, nine complete genomes of viruses from the genus Alphanodavirus and Betanodavirus (Family Nodaviridae) were comparatively analyzed and the data of their evolutionary origins and relatedness are reported. The nucleotide sequence alignment of the complete genomes from all species and their deduced evolutionary relationships are presented. High sequence similarity within the genus Betanodavirus compared to the genus Alphanodavirus was revealed in multiple sequence alignment of the Nodaviridae genomes. The amino acid sequence similarity for both RNA1 and RNA2 ORF is more conserved in Betanodavirus, compared to Alphanodavirus. The conserved and variable regions within the virus genome that were defined based on the multiple sequence alignments are presented in this dataset. Elsevier 2016-08-20 /pmc/articles/PMC5007544/ /pubmed/27617282 http://dx.doi.org/10.1016/j.dib.2016.08.025 Text en © 2016 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Data Article Low, Chen-Fei Bunawan, Hamidun Data set of phylogenetic analysis inferred based on the complete genomes of the family Nodaviridae |
title | Data set of phylogenetic analysis inferred based on the complete genomes of the family Nodaviridae |
title_full | Data set of phylogenetic analysis inferred based on the complete genomes of the family Nodaviridae |
title_fullStr | Data set of phylogenetic analysis inferred based on the complete genomes of the family Nodaviridae |
title_full_unstemmed | Data set of phylogenetic analysis inferred based on the complete genomes of the family Nodaviridae |
title_short | Data set of phylogenetic analysis inferred based on the complete genomes of the family Nodaviridae |
title_sort | data set of phylogenetic analysis inferred based on the complete genomes of the family nodaviridae |
topic | Data Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5007544/ https://www.ncbi.nlm.nih.gov/pubmed/27617282 http://dx.doi.org/10.1016/j.dib.2016.08.025 |
work_keys_str_mv | AT lowchenfei datasetofphylogeneticanalysisinferredbasedonthecompletegenomesofthefamilynodaviridae AT bunawanhamidun datasetofphylogeneticanalysisinferredbasedonthecompletegenomesofthefamilynodaviridae |