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BASE: a practical de novo assembler for large genomes using long NGS reads

BACKGROUND: De novo genome assembly using NGS data remains a computation-intensive task especially for large genomes. In practice, efficiency is often a primary concern and favors using a more efficient assembler like SOAPdenovo2. Yet SOAPdenovo2, based on de Bruijn graph, fails to take full advanta...

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Detalles Bibliográficos
Autores principales:	Liu, Binghang, Liu, Chi-Man, Li, Dinghua, Li, Yingrui, Ting, Hing-Fung, Yiu, Siu-Ming, Luo, Ruibang, Lam, Tak-Wah
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2016
Materias:	Research
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5009518/ https://www.ncbi.nlm.nih.gov/pubmed/27586129 http://dx.doi.org/10.1186/s12864-016-2829-5

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