Cargando…

Leveraging syntactic and semantic graph kernels to extract pharmacokinetic drug drug interactions from biomedical literature

BACKGROUND: Information about drug–drug interactions (DDIs) supported by scientific evidence is crucial for establishing computational knowledge bases for applications like pharmacovigilance. Since new reports of DDIs are rapidly accumulating in the scientific literature, text-mining techniques for...

Descripción completa

Detalles Bibliográficos
Autores principales:	Zhang, Yaoyun, Wu, Heng-Yi, Xu, Jun, Wang, Jingqi, Soysal, Ergin, Li, Lang, Xu, Hua
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2016
Materias:	Research
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5009562/ https://www.ncbi.nlm.nih.gov/pubmed/27585838 http://dx.doi.org/10.1186/s12918-016-0311-2

Ejemplares similares

Extracting drug-enzyme relation from literature as evidence for drug drug interaction
por: Zhang, Yaoyun, et al.
Publicado: (2016)

Integrating Multiple On-line Knowledge Bases for Disease-Lab Test Relation Extraction
por: Zhang, Yaoyun, et al.
Publicado: (2015)

Erratum to: Extracting drug-enzyme relation from literature as evidence for drug drug interaction
por: Zhang, Yaoyun, et al.
Publicado: (2016)

Exploiting graph kernels for high performance biomedical relation extraction
por: Panyam, Nagesh C., et al.
Publicado: (2018)

Temporal Relation Extraction with Joint Semantic and Syntactic Attention
por: Jin, Panpan, et al.
Publicado: (2022)

Exploiting syntactic and semantics information for chemical–disease relation extraction
por: Zhou, Huiwei, et al.
Publicado: (2016)

Leveraging biomedical and healthcare data: semantics, analytics and knowledge
por: Wang, Kevin, et al.
Publicado: (2018)

Syntactic and Semantic Bias Detection and Countermeasures
por: Englert, Roman, et al.
Publicado: (2020)

A Single Kernel-Based Approach to Extract Drug-Drug Interactions from Biomedical Literature
por: Zhang, Yijia, et al.
Publicado: (2012)

Integrating Semantic Information into Multiple Kernels for Protein-Protein Interaction Extraction from Biomedical Literatures
por: Li, Lishuang, et al.
Publicado: (2014)

Rapid infant learning of syntactic–semantic links
por: Barbir, Monica, et al.
Publicado: (2022)

Semantic and syntactic interoperability in online processing of big Earth observation data
por: Sudmanns, Martin, et al.
Publicado: (2017)

Leveraging graph topology and semantic context for pharmacovigilance through twitter-streams
por: Eshleman, Ryan, et al.
Publicado: (2016)

A shortest-path graph kernel for estimating gene product semantic similarity
por: Alvarez, Marco A, et al.
Publicado: (2011)

A Knowledge Graph of Combined Drug Therapies Using Semantic Predications From Biomedical Literature: Algorithm Development
por: Du, Jian, et al.
Publicado: (2020)

Extraction of Pharmacokinetic Evidence of Drug–Drug Interactions from the Literature
por: Kolchinsky, Artemy, et al.
Publicado: (2015)

Towards comprehensive syntactic and semantic annotations of the clinical narrative
por: Albright, Daniel, et al.
Publicado: (2013)

Semantic Richness Effects in Syntactic Classification: The Role of Feedback
por: Yap, Melvin J., et al.
Publicado: (2016)

Automatic Authorship Detection Using Textual Patterns Extracted from Integrated Syntactic Graphs
por: Gómez-Adorno, Helena, et al.
Publicado: (2016)

Drug prioritization using the semantic properties of a knowledge graph
por: Malas, Tareq B., et al.
Publicado: (2019)

The Syntactic and Semantic Processing of Mass and Count Nouns: An ERP Study
por: Chiarelli, Valentina, et al.
Publicado: (2011)

Remodularization Analysis for Microservice Discovery Using Syntactic and Semantic Clustering
por: De Alwis, Adambarage Anuruddha Chathuranga, et al.
Publicado: (2020)

Search and Graph Database Technologies for Biomedical Semantic Indexing: Experimental Analysis
por: Segura Bedmar, Isabel, et al.
Publicado: (2017)

Improving biomedical named entity recognition with syntactic information
por: Tian, Yuanhe, et al.
Publicado: (2020)

Relation Extraction in Biomedical Texts Based on Multi-Head Attention Model With Syntactic Dependency Feature: Modeling Study
por: Li, Yongbin, et al.
Publicado: (2022)

Syntactically-informed word representations from graph neural network
por: Tran, Thy Thy, et al.
Publicado: (2020)

The Influence of Task-Irrelevant Music on Language Processing: Syntactic and Semantic Structures
por: Hoch, Lisianne, et al.
Publicado: (2011)

Syntactic and semantic mastery of English auxiliaries by Kurd learners at college level
por: Sabir, Paiman Hama Salih
Publicado: (2016)

Influences of semantic and syntactic incongruence on readiness potential in turn-end anticipation
por: Wesselmeier, Hendrik, et al.
Publicado: (2014)

COVID-19 Knowledge Graph from semantic integration of biomedical literature and databases
por: Chen, Chuming, et al.
Publicado: (2021)

MedGraph: A semantic biomedical information retrieval framework using knowledge graph embedding for PubMed
por: Ebeid, Islam Akef
Publicado: (2022)

Biomedical semantics in the Semantic Web
por: Splendiani, Andrea, et al.
Publicado: (2011)

BioByGANS: biomedical named entity recognition by fusing contextual and syntactic features through graph attention network in node classification framework
por: Zheng, Xiangwen, et al.
Publicado: (2022)

Causal reasoning over knowledge graphs leveraging drug-perturbed and disease-specific transcriptomic signatures for drug discovery
por: Domingo-Fernández, Daniel, et al.
Publicado: (2022)

A weighted and integrated drug-target interactome: drug repurposing for schizophrenia as a use case
por: Huang, Liang-Chin, et al.
Publicado: (2015)

Semantic and Syntactic Interference in Sentence Comprehension: A Comparison of Working Memory Models
por: Tan, Yingying, et al.
Publicado: (2017)

Personality Recognition from Source Code Based on Lexical, Syntactic and Semantic Features
por: Biel, Mikołaj, et al.
Publicado: (2020)

BioVerbNet: a large semantic-syntactic classification of verbs in biomedicine
por: Majewska, Olga, et al.
Publicado: (2021)

A Comprehensive Evaluation of Graph Kernels for Unattributed Graphs
por: Zhang, Yi, et al.
Publicado: (2018)

Extracting semantically enriched events from biomedical literature
por: Miwa, Makoto, et al.
Publicado: (2012)

Cannot write session to /tmp/vufind_sessions/sess_0elqnkq5oh406suchch9g027km