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Genomic sequence analysis of a plant-associated Photobacterium halotolerans MELD1: from marine to terrestrial environment?

Mercury impacts the function and development of the central nervous system in both humans and wildlife by being a potent neurotoxin. Microbial bioremediation is an important means of remediation of mercury-contaminated soil. The rhizospheric Photobacterium halotolerans strain MELD1 was isolated from...

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Autores principales: Mathew, Dony Chacko, Lo, Shou-Chen, Mathew, Gincy Marina, Chang, Kung-Hao, Huang, Chieh-Chen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5009661/
https://www.ncbi.nlm.nih.gov/pubmed/27594975
http://dx.doi.org/10.1186/s40793-016-0177-3
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author Mathew, Dony Chacko
Lo, Shou-Chen
Mathew, Gincy Marina
Chang, Kung-Hao
Huang, Chieh-Chen
author_facet Mathew, Dony Chacko
Lo, Shou-Chen
Mathew, Gincy Marina
Chang, Kung-Hao
Huang, Chieh-Chen
author_sort Mathew, Dony Chacko
collection PubMed
description Mercury impacts the function and development of the central nervous system in both humans and wildlife by being a potent neurotoxin. Microbial bioremediation is an important means of remediation of mercury-contaminated soil. The rhizospheric Photobacterium halotolerans strain MELD1 was isolated from mercury and dioxin contaminated site from Tainan, Taiwan. It has been shown to reduce Hg(2+) to Hg(0). The 4,758,027 bp genome of P. halotolerans MELD1 has a G + C content of 50.88 % and contains 4198 protein-coding and 106 RNA genes. Genomic analysis revealed the presence of a number of interesting gene cluster that maybe involved in heavy metal resistance, rhizosphere competence and colonization of the host plant. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s40793-016-0177-3) contains supplementary material, which is available to authorized users.
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spelling pubmed-50096612016-09-03 Genomic sequence analysis of a plant-associated Photobacterium halotolerans MELD1: from marine to terrestrial environment? Mathew, Dony Chacko Lo, Shou-Chen Mathew, Gincy Marina Chang, Kung-Hao Huang, Chieh-Chen Stand Genomic Sci Short Genome Report Mercury impacts the function and development of the central nervous system in both humans and wildlife by being a potent neurotoxin. Microbial bioremediation is an important means of remediation of mercury-contaminated soil. The rhizospheric Photobacterium halotolerans strain MELD1 was isolated from mercury and dioxin contaminated site from Tainan, Taiwan. It has been shown to reduce Hg(2+) to Hg(0). The 4,758,027 bp genome of P. halotolerans MELD1 has a G + C content of 50.88 % and contains 4198 protein-coding and 106 RNA genes. Genomic analysis revealed the presence of a number of interesting gene cluster that maybe involved in heavy metal resistance, rhizosphere competence and colonization of the host plant. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s40793-016-0177-3) contains supplementary material, which is available to authorized users. BioMed Central 2016-09-01 /pmc/articles/PMC5009661/ /pubmed/27594975 http://dx.doi.org/10.1186/s40793-016-0177-3 Text en © The Author(s). 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Short Genome Report
Mathew, Dony Chacko
Lo, Shou-Chen
Mathew, Gincy Marina
Chang, Kung-Hao
Huang, Chieh-Chen
Genomic sequence analysis of a plant-associated Photobacterium halotolerans MELD1: from marine to terrestrial environment?
title Genomic sequence analysis of a plant-associated Photobacterium halotolerans MELD1: from marine to terrestrial environment?
title_full Genomic sequence analysis of a plant-associated Photobacterium halotolerans MELD1: from marine to terrestrial environment?
title_fullStr Genomic sequence analysis of a plant-associated Photobacterium halotolerans MELD1: from marine to terrestrial environment?
title_full_unstemmed Genomic sequence analysis of a plant-associated Photobacterium halotolerans MELD1: from marine to terrestrial environment?
title_short Genomic sequence analysis of a plant-associated Photobacterium halotolerans MELD1: from marine to terrestrial environment?
title_sort genomic sequence analysis of a plant-associated photobacterium halotolerans meld1: from marine to terrestrial environment?
topic Short Genome Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5009661/
https://www.ncbi.nlm.nih.gov/pubmed/27594975
http://dx.doi.org/10.1186/s40793-016-0177-3
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