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Genomic sequence analysis of a plant-associated Photobacterium halotolerans MELD1: from marine to terrestrial environment?
Mercury impacts the function and development of the central nervous system in both humans and wildlife by being a potent neurotoxin. Microbial bioremediation is an important means of remediation of mercury-contaminated soil. The rhizospheric Photobacterium halotolerans strain MELD1 was isolated from...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5009661/ https://www.ncbi.nlm.nih.gov/pubmed/27594975 http://dx.doi.org/10.1186/s40793-016-0177-3 |
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author | Mathew, Dony Chacko Lo, Shou-Chen Mathew, Gincy Marina Chang, Kung-Hao Huang, Chieh-Chen |
author_facet | Mathew, Dony Chacko Lo, Shou-Chen Mathew, Gincy Marina Chang, Kung-Hao Huang, Chieh-Chen |
author_sort | Mathew, Dony Chacko |
collection | PubMed |
description | Mercury impacts the function and development of the central nervous system in both humans and wildlife by being a potent neurotoxin. Microbial bioremediation is an important means of remediation of mercury-contaminated soil. The rhizospheric Photobacterium halotolerans strain MELD1 was isolated from mercury and dioxin contaminated site from Tainan, Taiwan. It has been shown to reduce Hg(2+) to Hg(0). The 4,758,027 bp genome of P. halotolerans MELD1 has a G + C content of 50.88 % and contains 4198 protein-coding and 106 RNA genes. Genomic analysis revealed the presence of a number of interesting gene cluster that maybe involved in heavy metal resistance, rhizosphere competence and colonization of the host plant. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s40793-016-0177-3) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-5009661 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-50096612016-09-03 Genomic sequence analysis of a plant-associated Photobacterium halotolerans MELD1: from marine to terrestrial environment? Mathew, Dony Chacko Lo, Shou-Chen Mathew, Gincy Marina Chang, Kung-Hao Huang, Chieh-Chen Stand Genomic Sci Short Genome Report Mercury impacts the function and development of the central nervous system in both humans and wildlife by being a potent neurotoxin. Microbial bioremediation is an important means of remediation of mercury-contaminated soil. The rhizospheric Photobacterium halotolerans strain MELD1 was isolated from mercury and dioxin contaminated site from Tainan, Taiwan. It has been shown to reduce Hg(2+) to Hg(0). The 4,758,027 bp genome of P. halotolerans MELD1 has a G + C content of 50.88 % and contains 4198 protein-coding and 106 RNA genes. Genomic analysis revealed the presence of a number of interesting gene cluster that maybe involved in heavy metal resistance, rhizosphere competence and colonization of the host plant. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s40793-016-0177-3) contains supplementary material, which is available to authorized users. BioMed Central 2016-09-01 /pmc/articles/PMC5009661/ /pubmed/27594975 http://dx.doi.org/10.1186/s40793-016-0177-3 Text en © The Author(s). 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Short Genome Report Mathew, Dony Chacko Lo, Shou-Chen Mathew, Gincy Marina Chang, Kung-Hao Huang, Chieh-Chen Genomic sequence analysis of a plant-associated Photobacterium halotolerans MELD1: from marine to terrestrial environment? |
title | Genomic sequence analysis of a plant-associated Photobacterium halotolerans MELD1: from marine to terrestrial environment? |
title_full | Genomic sequence analysis of a plant-associated Photobacterium halotolerans MELD1: from marine to terrestrial environment? |
title_fullStr | Genomic sequence analysis of a plant-associated Photobacterium halotolerans MELD1: from marine to terrestrial environment? |
title_full_unstemmed | Genomic sequence analysis of a plant-associated Photobacterium halotolerans MELD1: from marine to terrestrial environment? |
title_short | Genomic sequence analysis of a plant-associated Photobacterium halotolerans MELD1: from marine to terrestrial environment? |
title_sort | genomic sequence analysis of a plant-associated photobacterium halotolerans meld1: from marine to terrestrial environment? |
topic | Short Genome Report |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5009661/ https://www.ncbi.nlm.nih.gov/pubmed/27594975 http://dx.doi.org/10.1186/s40793-016-0177-3 |
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