Short tandem repeat number estimation from paired-end reads for multiple individuals by considering coalescent tree

BACKGROUND: Two types of approaches are mainly considered for the repeat number estimation in short tandem repeat (STR) regions from high-throughput sequencing data: approaches directly counting repeat patterns included in sequence reads spanning the region and approaches based on detecting the diff...

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Detalles Bibliográficos
Autores principales: Kojima, Kaname, Kawai, Yosuke, Nariai, Naoki, Mimori, Takahiro, Hasegawa, Takanori, Nagasaki, Masao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2016
Materias:
Research
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5009668/
https://www.ncbi.nlm.nih.gov/pubmed/27586631
http://dx.doi.org/10.1186/s12864-016-2821-0

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