Cargando…
Free energy analysis and mechanism of base pair stacking in nicked DNA
The equilibrium of stacked and unstacked base pairs is of central importance for all nucleic acid structure formation processes. The stacking equilibrium is influenced by intramolecular interactions between nucleosides but also by interactions with the solvent. Realistic simulations on nucleic acid...
Autores principales: | Häse, Florian, Zacharias, Martin |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2016
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5009751/ https://www.ncbi.nlm.nih.gov/pubmed/27407106 http://dx.doi.org/10.1093/nar/gkw607 |
Ejemplares similares
-
Role of the closing base pair for d(GCA) hairpin stability: free energy analysis and folding simulations
por: Kannan, Srinivasaraghavan, et al.
Publicado: (2011) -
Investigating the sequence-dependent mechanical properties of DNA nicks for applications in twisted DNA nanostructure design
por: Lee, Jae Young, et al.
Publicado: (2019) -
Generation of supercoils in nicked and gapped DNA drives DNA unknotting and postreplicative decatenation
por: Racko, Dusan, et al.
Publicado: (2015) -
Free energy landscape and transition pathways from Watson–Crick to Hoogsteen base pairing in free duplex DNA
por: Yang, Changwon, et al.
Publicado: (2015) -
Expanding the editable genome and CRISPR–Cas9 versatility using DNA cutting-free gene targeting based on in trans paired nicking
por: Chen, Xiaoyu, et al.
Publicado: (2020)