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GRASPx: efficient homolog-search of short peptide metagenome database through simultaneous alignment and assembly

BACKGROUND: Metagenomics is a cultivation-independent approach that enables the study of the genomic composition of microbes present in an environment. Metagenomic samples are routinely sequenced using next-generation sequencing technologies that generate short nucleotide reads. Proteins identified...

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Detalles Bibliográficos
Autores principales: Zhong, Cuncong, Yang, Youngik, Yooseph, Shibu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5009819/
https://www.ncbi.nlm.nih.gov/pubmed/27585568
http://dx.doi.org/10.1186/s12859-016-1119-1

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