Cargando…

Performance Evaluation of the Real-Q Cytomegalovirus (CMV) Quantification Kit Using Two Real-Time PCR Systems for Quantifying CMV DNA in Whole Blood

Standardized cytomegalovirus (CMV) DNA quantification is important for managing CMV disease. We evaluated the performance of the Real-Q CMV Quantification Kit (Real-Q assay; BioSewoom, Korea) using whole blood (WB), with nucleic acid extraction using MagNA Pure 96 (Roche Diagnostics, Germany). Real-...

Descripción completa

Detalles Bibliográficos
Autores principales: Park, Jong Eun, Kim, Ji-Youn, Yun, Sun Ae, Lee, Myoung-Keun, Huh, Hee Jae, Kim, Jong-Won, Ki, Chang-Seok
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Korean Society for Laboratory Medicine 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5011116/
https://www.ncbi.nlm.nih.gov/pubmed/27578516
http://dx.doi.org/10.3343/alm.2016.36.6.603
_version_ 1782451764914552832
author Park, Jong Eun
Kim, Ji-Youn
Yun, Sun Ae
Lee, Myoung-Keun
Huh, Hee Jae
Kim, Jong-Won
Ki, Chang-Seok
author_facet Park, Jong Eun
Kim, Ji-Youn
Yun, Sun Ae
Lee, Myoung-Keun
Huh, Hee Jae
Kim, Jong-Won
Ki, Chang-Seok
author_sort Park, Jong Eun
collection PubMed
description Standardized cytomegalovirus (CMV) DNA quantification is important for managing CMV disease. We evaluated the performance of the Real-Q CMV Quantification Kit (Real-Q assay; BioSewoom, Korea) using whole blood (WB), with nucleic acid extraction using MagNA Pure 96 (Roche Diagnostics, Germany). Real-time PCR was performed on two platforms: the 7500 Fast real-time PCR (7500 Fast; Applied Biosystems, USA) and CFX96 real-time PCR detection (CFX96; Bio-Rad, USA) systems. The WHO international standard, diluted with CMV-negative WB, was used to validate the analytical performance. We used 90 WB clinical samples for comparison with the artus CMV RG PCR kit (artus assay; Qiagen, Germany). Limits of detections (LODs) in 7500 Fast and CFX96 were 367 and 479 IU/mL, respectively. The assay was linear from the LOD to 10(6) IU/mL (R(2) ≥0.9886). The conversion factors from copies to IU in 7500 Fast and CFX96 were 0.95 and 1.06, respectively. Compared with the artus assay, for values <1,000 copies/mL, 100% of the samples had a variation <0.7 log(10) copies/mL; >1,000 copies/mL, 73.3% and 80.6% of samples in 7500 Fast and CFX96, respectively, had <0.5 log(10) copies/mL. The Real-Q assay is useful for quantifying CMV in WB with the two real-time PCR platforms.
format Online
Article
Text
id pubmed-5011116
institution National Center for Biotechnology Information
language English
publishDate 2016
publisher The Korean Society for Laboratory Medicine
record_format MEDLINE/PubMed
spelling pubmed-50111162016-11-01 Performance Evaluation of the Real-Q Cytomegalovirus (CMV) Quantification Kit Using Two Real-Time PCR Systems for Quantifying CMV DNA in Whole Blood Park, Jong Eun Kim, Ji-Youn Yun, Sun Ae Lee, Myoung-Keun Huh, Hee Jae Kim, Jong-Won Ki, Chang-Seok Ann Lab Med Brief Communication Standardized cytomegalovirus (CMV) DNA quantification is important for managing CMV disease. We evaluated the performance of the Real-Q CMV Quantification Kit (Real-Q assay; BioSewoom, Korea) using whole blood (WB), with nucleic acid extraction using MagNA Pure 96 (Roche Diagnostics, Germany). Real-time PCR was performed on two platforms: the 7500 Fast real-time PCR (7500 Fast; Applied Biosystems, USA) and CFX96 real-time PCR detection (CFX96; Bio-Rad, USA) systems. The WHO international standard, diluted with CMV-negative WB, was used to validate the analytical performance. We used 90 WB clinical samples for comparison with the artus CMV RG PCR kit (artus assay; Qiagen, Germany). Limits of detections (LODs) in 7500 Fast and CFX96 were 367 and 479 IU/mL, respectively. The assay was linear from the LOD to 10(6) IU/mL (R(2) ≥0.9886). The conversion factors from copies to IU in 7500 Fast and CFX96 were 0.95 and 1.06, respectively. Compared with the artus assay, for values <1,000 copies/mL, 100% of the samples had a variation <0.7 log(10) copies/mL; >1,000 copies/mL, 73.3% and 80.6% of samples in 7500 Fast and CFX96, respectively, had <0.5 log(10) copies/mL. The Real-Q assay is useful for quantifying CMV in WB with the two real-time PCR platforms. The Korean Society for Laboratory Medicine 2016-11 2016-08-24 /pmc/articles/PMC5011116/ /pubmed/27578516 http://dx.doi.org/10.3343/alm.2016.36.6.603 Text en © The Korean Society for Laboratory Medicine. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Brief Communication
Park, Jong Eun
Kim, Ji-Youn
Yun, Sun Ae
Lee, Myoung-Keun
Huh, Hee Jae
Kim, Jong-Won
Ki, Chang-Seok
Performance Evaluation of the Real-Q Cytomegalovirus (CMV) Quantification Kit Using Two Real-Time PCR Systems for Quantifying CMV DNA in Whole Blood
title Performance Evaluation of the Real-Q Cytomegalovirus (CMV) Quantification Kit Using Two Real-Time PCR Systems for Quantifying CMV DNA in Whole Blood
title_full Performance Evaluation of the Real-Q Cytomegalovirus (CMV) Quantification Kit Using Two Real-Time PCR Systems for Quantifying CMV DNA in Whole Blood
title_fullStr Performance Evaluation of the Real-Q Cytomegalovirus (CMV) Quantification Kit Using Two Real-Time PCR Systems for Quantifying CMV DNA in Whole Blood
title_full_unstemmed Performance Evaluation of the Real-Q Cytomegalovirus (CMV) Quantification Kit Using Two Real-Time PCR Systems for Quantifying CMV DNA in Whole Blood
title_short Performance Evaluation of the Real-Q Cytomegalovirus (CMV) Quantification Kit Using Two Real-Time PCR Systems for Quantifying CMV DNA in Whole Blood
title_sort performance evaluation of the real-q cytomegalovirus (cmv) quantification kit using two real-time pcr systems for quantifying cmv dna in whole blood
topic Brief Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5011116/
https://www.ncbi.nlm.nih.gov/pubmed/27578516
http://dx.doi.org/10.3343/alm.2016.36.6.603
work_keys_str_mv AT parkjongeun performanceevaluationoftherealqcytomegaloviruscmvquantificationkitusingtworealtimepcrsystemsforquantifyingcmvdnainwholeblood
AT kimjiyoun performanceevaluationoftherealqcytomegaloviruscmvquantificationkitusingtworealtimepcrsystemsforquantifyingcmvdnainwholeblood
AT yunsunae performanceevaluationoftherealqcytomegaloviruscmvquantificationkitusingtworealtimepcrsystemsforquantifyingcmvdnainwholeblood
AT leemyoungkeun performanceevaluationoftherealqcytomegaloviruscmvquantificationkitusingtworealtimepcrsystemsforquantifyingcmvdnainwholeblood
AT huhheejae performanceevaluationoftherealqcytomegaloviruscmvquantificationkitusingtworealtimepcrsystemsforquantifyingcmvdnainwholeblood
AT kimjongwon performanceevaluationoftherealqcytomegaloviruscmvquantificationkitusingtworealtimepcrsystemsforquantifyingcmvdnainwholeblood
AT kichangseok performanceevaluationoftherealqcytomegaloviruscmvquantificationkitusingtworealtimepcrsystemsforquantifyingcmvdnainwholeblood