Cargando…
3D-QSAR modelling dataset of bioflavonoids for predicting the potential modulatory effect on P-glycoprotein activity
The data is obtained from exploring the modulatory activities of bioflavonoids on P-glycoprotein function by ligand-based approaches. Multivariate Linear-QSAR models for predicting the induced/inhibitory activities of the flavonoids were created. Molecular descriptors were initially used as independ...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2016
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5011158/ https://www.ncbi.nlm.nih.gov/pubmed/27626051 http://dx.doi.org/10.1016/j.dib.2016.08.004 |
_version_ | 1782451773401726976 |
---|---|
author | Wongrattanakamon, Pathomwat Lee, Vannajan Sanghiran Nimmanpipug, Piyarat Jiranusornkul, Supat |
author_facet | Wongrattanakamon, Pathomwat Lee, Vannajan Sanghiran Nimmanpipug, Piyarat Jiranusornkul, Supat |
author_sort | Wongrattanakamon, Pathomwat |
collection | PubMed |
description | The data is obtained from exploring the modulatory activities of bioflavonoids on P-glycoprotein function by ligand-based approaches. Multivariate Linear-QSAR models for predicting the induced/inhibitory activities of the flavonoids were created. Molecular descriptors were initially used as independent variables and a dependent variable was expressed as pFAR. The variables were then used in MLR analysis by stepwise regression calculation to build the linear QSAR data. The entire dataset consisted of 23 bioflavonoids was used as a training set. Regarding the obtained MLR QSAR model, R of 0.963, R(2)=0.927, [Formula: see text] , SEE=0.197, F=33.849 and q(2)=0.927 were achieved. The true predictabilities of QSAR model were justified by evaluation with the external dataset (Table 4). The pFARs of representative flavonoids were predicted by MLR QSAR modelling. The data showed that internal and external validations may generate the same conclusion. |
format | Online Article Text |
id | pubmed-5011158 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-50111582016-09-13 3D-QSAR modelling dataset of bioflavonoids for predicting the potential modulatory effect on P-glycoprotein activity Wongrattanakamon, Pathomwat Lee, Vannajan Sanghiran Nimmanpipug, Piyarat Jiranusornkul, Supat Data Brief Data Article The data is obtained from exploring the modulatory activities of bioflavonoids on P-glycoprotein function by ligand-based approaches. Multivariate Linear-QSAR models for predicting the induced/inhibitory activities of the flavonoids were created. Molecular descriptors were initially used as independent variables and a dependent variable was expressed as pFAR. The variables were then used in MLR analysis by stepwise regression calculation to build the linear QSAR data. The entire dataset consisted of 23 bioflavonoids was used as a training set. Regarding the obtained MLR QSAR model, R of 0.963, R(2)=0.927, [Formula: see text] , SEE=0.197, F=33.849 and q(2)=0.927 were achieved. The true predictabilities of QSAR model were justified by evaluation with the external dataset (Table 4). The pFARs of representative flavonoids were predicted by MLR QSAR modelling. The data showed that internal and external validations may generate the same conclusion. Elsevier 2016-08-04 /pmc/articles/PMC5011158/ /pubmed/27626051 http://dx.doi.org/10.1016/j.dib.2016.08.004 Text en © 2016 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Data Article Wongrattanakamon, Pathomwat Lee, Vannajan Sanghiran Nimmanpipug, Piyarat Jiranusornkul, Supat 3D-QSAR modelling dataset of bioflavonoids for predicting the potential modulatory effect on P-glycoprotein activity |
title | 3D-QSAR modelling dataset of bioflavonoids for predicting the potential modulatory effect on P-glycoprotein activity |
title_full | 3D-QSAR modelling dataset of bioflavonoids for predicting the potential modulatory effect on P-glycoprotein activity |
title_fullStr | 3D-QSAR modelling dataset of bioflavonoids for predicting the potential modulatory effect on P-glycoprotein activity |
title_full_unstemmed | 3D-QSAR modelling dataset of bioflavonoids for predicting the potential modulatory effect on P-glycoprotein activity |
title_short | 3D-QSAR modelling dataset of bioflavonoids for predicting the potential modulatory effect on P-glycoprotein activity |
title_sort | 3d-qsar modelling dataset of bioflavonoids for predicting the potential modulatory effect on p-glycoprotein activity |
topic | Data Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5011158/ https://www.ncbi.nlm.nih.gov/pubmed/27626051 http://dx.doi.org/10.1016/j.dib.2016.08.004 |
work_keys_str_mv | AT wongrattanakamonpathomwat 3dqsarmodellingdatasetofbioflavonoidsforpredictingthepotentialmodulatoryeffectonpglycoproteinactivity AT leevannajansanghiran 3dqsarmodellingdatasetofbioflavonoidsforpredictingthepotentialmodulatoryeffectonpglycoproteinactivity AT nimmanpipugpiyarat 3dqsarmodellingdatasetofbioflavonoidsforpredictingthepotentialmodulatoryeffectonpglycoproteinactivity AT jiranusornkulsupat 3dqsarmodellingdatasetofbioflavonoidsforpredictingthepotentialmodulatoryeffectonpglycoproteinactivity |