Cargando…

Next-generation sequencing-based molecular diagnosis of 35 Hispanic retinitis pigmentosa probands

Retinitis pigmentosa (RP) is a heterogeneous group of inherited retinal diseases. The prevalence of RP and the mutation spectrum vary across populations. Hispanic people account for approximately 17% of the United States population, and the genetic etiologies of RP of this ethnic group still remain...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhang, Qi, Xu, Mingchu, Verriotto, Jennifer D., Li, Yumei, Wang, Hui, Gan, Lin, Lam, Byron L., Chen, Rui
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5011706/
https://www.ncbi.nlm.nih.gov/pubmed/27596865
http://dx.doi.org/10.1038/srep32792
_version_ 1782451877188730880
author Zhang, Qi
Xu, Mingchu
Verriotto, Jennifer D.
Li, Yumei
Wang, Hui
Gan, Lin
Lam, Byron L.
Chen, Rui
author_facet Zhang, Qi
Xu, Mingchu
Verriotto, Jennifer D.
Li, Yumei
Wang, Hui
Gan, Lin
Lam, Byron L.
Chen, Rui
author_sort Zhang, Qi
collection PubMed
description Retinitis pigmentosa (RP) is a heterogeneous group of inherited retinal diseases. The prevalence of RP and the mutation spectrum vary across populations. Hispanic people account for approximately 17% of the United States population, and the genetic etiologies of RP of this ethnic group still remain not well defined. Utilizing next-generation sequencing (NGS), we screened mutations in known retinal disease-causing genes in an RP cohort of 35 unrelated Hispanic probands from the Miami area. We achieved a solving rate of 66% and identified 15 novel putative pathogenic mutations, including a frequent founder mutation disrupting PRPF31 splicing. Our data show that the mutation spectrum of Hispanic RP receives a significant impact from disease-causing alleles of Spanish origin and may also contain population-specific alleles.
format Online
Article
Text
id pubmed-5011706
institution National Center for Biotechnology Information
language English
publishDate 2016
publisher Nature Publishing Group
record_format MEDLINE/PubMed
spelling pubmed-50117062016-09-12 Next-generation sequencing-based molecular diagnosis of 35 Hispanic retinitis pigmentosa probands Zhang, Qi Xu, Mingchu Verriotto, Jennifer D. Li, Yumei Wang, Hui Gan, Lin Lam, Byron L. Chen, Rui Sci Rep Article Retinitis pigmentosa (RP) is a heterogeneous group of inherited retinal diseases. The prevalence of RP and the mutation spectrum vary across populations. Hispanic people account for approximately 17% of the United States population, and the genetic etiologies of RP of this ethnic group still remain not well defined. Utilizing next-generation sequencing (NGS), we screened mutations in known retinal disease-causing genes in an RP cohort of 35 unrelated Hispanic probands from the Miami area. We achieved a solving rate of 66% and identified 15 novel putative pathogenic mutations, including a frequent founder mutation disrupting PRPF31 splicing. Our data show that the mutation spectrum of Hispanic RP receives a significant impact from disease-causing alleles of Spanish origin and may also contain population-specific alleles. Nature Publishing Group 2016-09-06 /pmc/articles/PMC5011706/ /pubmed/27596865 http://dx.doi.org/10.1038/srep32792 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Zhang, Qi
Xu, Mingchu
Verriotto, Jennifer D.
Li, Yumei
Wang, Hui
Gan, Lin
Lam, Byron L.
Chen, Rui
Next-generation sequencing-based molecular diagnosis of 35 Hispanic retinitis pigmentosa probands
title Next-generation sequencing-based molecular diagnosis of 35 Hispanic retinitis pigmentosa probands
title_full Next-generation sequencing-based molecular diagnosis of 35 Hispanic retinitis pigmentosa probands
title_fullStr Next-generation sequencing-based molecular diagnosis of 35 Hispanic retinitis pigmentosa probands
title_full_unstemmed Next-generation sequencing-based molecular diagnosis of 35 Hispanic retinitis pigmentosa probands
title_short Next-generation sequencing-based molecular diagnosis of 35 Hispanic retinitis pigmentosa probands
title_sort next-generation sequencing-based molecular diagnosis of 35 hispanic retinitis pigmentosa probands
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5011706/
https://www.ncbi.nlm.nih.gov/pubmed/27596865
http://dx.doi.org/10.1038/srep32792
work_keys_str_mv AT zhangqi nextgenerationsequencingbasedmoleculardiagnosisof35hispanicretinitispigmentosaprobands
AT xumingchu nextgenerationsequencingbasedmoleculardiagnosisof35hispanicretinitispigmentosaprobands
AT verriottojenniferd nextgenerationsequencingbasedmoleculardiagnosisof35hispanicretinitispigmentosaprobands
AT liyumei nextgenerationsequencingbasedmoleculardiagnosisof35hispanicretinitispigmentosaprobands
AT wanghui nextgenerationsequencingbasedmoleculardiagnosisof35hispanicretinitispigmentosaprobands
AT ganlin nextgenerationsequencingbasedmoleculardiagnosisof35hispanicretinitispigmentosaprobands
AT lambyronl nextgenerationsequencingbasedmoleculardiagnosisof35hispanicretinitispigmentosaprobands
AT chenrui nextgenerationsequencingbasedmoleculardiagnosisof35hispanicretinitispigmentosaprobands