Near complete genome sequence of the animal feed probiotic, Bacillus amyloliquefaciens H57

Bacillus amyloliquefaciens H57 is a bacterium isolated from lucerne for its ability to prevent feed spoilage. Further interest developed when ruminants fed with H57-inoculated hay showed increased weight gain and nitrogen retention relative to controls, suggesting a probiotic effect. The near comple...

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Autores principales: Schofield, Benjamin J., Skarshewski, Adam, Lachner, Nancy, Ouwerkerk, Diane, Klieve, Athol V., Dart, Peter, Hugenholtz, Philip
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2016
Materias:
Short Genome Report
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5012032/
https://www.ncbi.nlm.nih.gov/pubmed/27602182
http://dx.doi.org/10.1186/s40793-016-0189-z
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author Schofield, Benjamin J.
Skarshewski, Adam
Lachner, Nancy
Ouwerkerk, Diane
Klieve, Athol V.
Dart, Peter
Hugenholtz, Philip
author_facet Schofield, Benjamin J.
Skarshewski, Adam
Lachner, Nancy
Ouwerkerk, Diane
Klieve, Athol V.
Dart, Peter
Hugenholtz, Philip
author_sort Schofield, Benjamin J.
collection PubMed
description Bacillus amyloliquefaciens H57 is a bacterium isolated from lucerne for its ability to prevent feed spoilage. Further interest developed when ruminants fed with H57-inoculated hay showed increased weight gain and nitrogen retention relative to controls, suggesting a probiotic effect. The near complete genome of H57 is ~3.96 Mb comprising 16 contigs. Within the genome there are 3,836 protein coding genes, an estimated sixteen rRNA genes and 69 tRNA genes. H57 has the potential to synthesise four different lipopeptides and four polyketide compounds, which are known antimicrobials. This antimicrobial capacity may facilitate the observed probiotic effect.
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spelling pubmed-50120322016-09-07 Near complete genome sequence of the animal feed probiotic, Bacillus amyloliquefaciens H57 Schofield, Benjamin J. Skarshewski, Adam Lachner, Nancy Ouwerkerk, Diane Klieve, Athol V. Dart, Peter Hugenholtz, Philip Stand Genomic Sci Short Genome Report Bacillus amyloliquefaciens H57 is a bacterium isolated from lucerne for its ability to prevent feed spoilage. Further interest developed when ruminants fed with H57-inoculated hay showed increased weight gain and nitrogen retention relative to controls, suggesting a probiotic effect. The near complete genome of H57 is ~3.96 Mb comprising 16 contigs. Within the genome there are 3,836 protein coding genes, an estimated sixteen rRNA genes and 69 tRNA genes. H57 has the potential to synthesise four different lipopeptides and four polyketide compounds, which are known antimicrobials. This antimicrobial capacity may facilitate the observed probiotic effect. BioMed Central 2016-09-06 /pmc/articles/PMC5012032/ /pubmed/27602182 http://dx.doi.org/10.1186/s40793-016-0189-z Text en © The Author(s). 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Short Genome Report
Schofield, Benjamin J.
Skarshewski, Adam
Lachner, Nancy
Ouwerkerk, Diane
Klieve, Athol V.
Dart, Peter
Hugenholtz, Philip
Near complete genome sequence of the animal feed probiotic, Bacillus amyloliquefaciens H57
title Near complete genome sequence of the animal feed probiotic, Bacillus amyloliquefaciens H57
title_full Near complete genome sequence of the animal feed probiotic, Bacillus amyloliquefaciens H57
title_fullStr Near complete genome sequence of the animal feed probiotic, Bacillus amyloliquefaciens H57
title_full_unstemmed Near complete genome sequence of the animal feed probiotic, Bacillus amyloliquefaciens H57
title_short Near complete genome sequence of the animal feed probiotic, Bacillus amyloliquefaciens H57
title_sort near complete genome sequence of the animal feed probiotic, bacillus amyloliquefaciens h57
topic Short Genome Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5012032/
https://www.ncbi.nlm.nih.gov/pubmed/27602182
http://dx.doi.org/10.1186/s40793-016-0189-z
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