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Joint estimation of preferential attachment and node fitness in growing complex networks

Complex network growth across diverse fields of science is hypothesized to be driven in the main by a combination of preferential attachment and node fitness processes. For measuring the respective influences of these processes, previous approaches make strong and untested assumptions on the functio...

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Autores principales: Pham, Thong, Sheridan, Paul, Shimodaira, Hidetoshi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5013469/
https://www.ncbi.nlm.nih.gov/pubmed/27601314
http://dx.doi.org/10.1038/srep32558
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author Pham, Thong
Sheridan, Paul
Shimodaira, Hidetoshi
author_facet Pham, Thong
Sheridan, Paul
Shimodaira, Hidetoshi
author_sort Pham, Thong
collection PubMed
description Complex network growth across diverse fields of science is hypothesized to be driven in the main by a combination of preferential attachment and node fitness processes. For measuring the respective influences of these processes, previous approaches make strong and untested assumptions on the functional forms of either the preferential attachment function or fitness function or both. We introduce a Bayesian statistical method called PAFit to estimate preferential attachment and node fitness without imposing such functional constraints that works by maximizing a log-likelihood function with suitably added regularization terms. We use PAFit to investigate the interplay between preferential attachment and node fitness processes in a Facebook wall-post network. While we uncover evidence for both preferential attachment and node fitness, thus validating the hypothesis that these processes together drive complex network evolution, we also find that node fitness plays the bigger role in determining the degree of a node. This is the first validation of its kind on real-world network data. But surprisingly the rate of preferential attachment is found to deviate from the conventional log-linear form when node fitness is taken into account. The proposed method is implemented in the R package PAFit.
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spelling pubmed-50134692016-09-12 Joint estimation of preferential attachment and node fitness in growing complex networks Pham, Thong Sheridan, Paul Shimodaira, Hidetoshi Sci Rep Article Complex network growth across diverse fields of science is hypothesized to be driven in the main by a combination of preferential attachment and node fitness processes. For measuring the respective influences of these processes, previous approaches make strong and untested assumptions on the functional forms of either the preferential attachment function or fitness function or both. We introduce a Bayesian statistical method called PAFit to estimate preferential attachment and node fitness without imposing such functional constraints that works by maximizing a log-likelihood function with suitably added regularization terms. We use PAFit to investigate the interplay between preferential attachment and node fitness processes in a Facebook wall-post network. While we uncover evidence for both preferential attachment and node fitness, thus validating the hypothesis that these processes together drive complex network evolution, we also find that node fitness plays the bigger role in determining the degree of a node. This is the first validation of its kind on real-world network data. But surprisingly the rate of preferential attachment is found to deviate from the conventional log-linear form when node fitness is taken into account. The proposed method is implemented in the R package PAFit. Nature Publishing Group 2016-09-07 /pmc/articles/PMC5013469/ /pubmed/27601314 http://dx.doi.org/10.1038/srep32558 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Pham, Thong
Sheridan, Paul
Shimodaira, Hidetoshi
Joint estimation of preferential attachment and node fitness in growing complex networks
title Joint estimation of preferential attachment and node fitness in growing complex networks
title_full Joint estimation of preferential attachment and node fitness in growing complex networks
title_fullStr Joint estimation of preferential attachment and node fitness in growing complex networks
title_full_unstemmed Joint estimation of preferential attachment and node fitness in growing complex networks
title_short Joint estimation of preferential attachment and node fitness in growing complex networks
title_sort joint estimation of preferential attachment and node fitness in growing complex networks
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5013469/
https://www.ncbi.nlm.nih.gov/pubmed/27601314
http://dx.doi.org/10.1038/srep32558
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