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Joint estimation of preferential attachment and node fitness in growing complex networks
Complex network growth across diverse fields of science is hypothesized to be driven in the main by a combination of preferential attachment and node fitness processes. For measuring the respective influences of these processes, previous approaches make strong and untested assumptions on the functio...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5013469/ https://www.ncbi.nlm.nih.gov/pubmed/27601314 http://dx.doi.org/10.1038/srep32558 |
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author | Pham, Thong Sheridan, Paul Shimodaira, Hidetoshi |
author_facet | Pham, Thong Sheridan, Paul Shimodaira, Hidetoshi |
author_sort | Pham, Thong |
collection | PubMed |
description | Complex network growth across diverse fields of science is hypothesized to be driven in the main by a combination of preferential attachment and node fitness processes. For measuring the respective influences of these processes, previous approaches make strong and untested assumptions on the functional forms of either the preferential attachment function or fitness function or both. We introduce a Bayesian statistical method called PAFit to estimate preferential attachment and node fitness without imposing such functional constraints that works by maximizing a log-likelihood function with suitably added regularization terms. We use PAFit to investigate the interplay between preferential attachment and node fitness processes in a Facebook wall-post network. While we uncover evidence for both preferential attachment and node fitness, thus validating the hypothesis that these processes together drive complex network evolution, we also find that node fitness plays the bigger role in determining the degree of a node. This is the first validation of its kind on real-world network data. But surprisingly the rate of preferential attachment is found to deviate from the conventional log-linear form when node fitness is taken into account. The proposed method is implemented in the R package PAFit. |
format | Online Article Text |
id | pubmed-5013469 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-50134692016-09-12 Joint estimation of preferential attachment and node fitness in growing complex networks Pham, Thong Sheridan, Paul Shimodaira, Hidetoshi Sci Rep Article Complex network growth across diverse fields of science is hypothesized to be driven in the main by a combination of preferential attachment and node fitness processes. For measuring the respective influences of these processes, previous approaches make strong and untested assumptions on the functional forms of either the preferential attachment function or fitness function or both. We introduce a Bayesian statistical method called PAFit to estimate preferential attachment and node fitness without imposing such functional constraints that works by maximizing a log-likelihood function with suitably added regularization terms. We use PAFit to investigate the interplay between preferential attachment and node fitness processes in a Facebook wall-post network. While we uncover evidence for both preferential attachment and node fitness, thus validating the hypothesis that these processes together drive complex network evolution, we also find that node fitness plays the bigger role in determining the degree of a node. This is the first validation of its kind on real-world network data. But surprisingly the rate of preferential attachment is found to deviate from the conventional log-linear form when node fitness is taken into account. The proposed method is implemented in the R package PAFit. Nature Publishing Group 2016-09-07 /pmc/articles/PMC5013469/ /pubmed/27601314 http://dx.doi.org/10.1038/srep32558 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Pham, Thong Sheridan, Paul Shimodaira, Hidetoshi Joint estimation of preferential attachment and node fitness in growing complex networks |
title | Joint estimation of preferential attachment and node fitness in growing complex networks |
title_full | Joint estimation of preferential attachment and node fitness in growing complex networks |
title_fullStr | Joint estimation of preferential attachment and node fitness in growing complex networks |
title_full_unstemmed | Joint estimation of preferential attachment and node fitness in growing complex networks |
title_short | Joint estimation of preferential attachment and node fitness in growing complex networks |
title_sort | joint estimation of preferential attachment and node fitness in growing complex networks |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5013469/ https://www.ncbi.nlm.nih.gov/pubmed/27601314 http://dx.doi.org/10.1038/srep32558 |
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