Cargando…

Variation in the Dicer and RAN Genes Are Associated with Survival in Patients with Hepatocellular Carcinoma

Single-nucleotide polymorphisms (SNPs) in microRNA machinery genes might affect microRNA processing and subsequently impact tumorigenesis. The aim of this study was to investigate the associations between SNPs in microRNA machinery genes and hepatocellular carcinoma (HCC) in a Korean population. Gen...

Descripción completa

Detalles Bibliográficos
Autores principales: Kim, Mi Na, Kim, Jung Oh, Lee, Seung Min, Park, Hana, Lee, Ju Ho, Rim, Kyu Sung, Hwang, Seong Gyu, Kim, Nam Keun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5017754/
https://www.ncbi.nlm.nih.gov/pubmed/27611467
http://dx.doi.org/10.1371/journal.pone.0162279
_version_ 1782452812961021952
author Kim, Mi Na
Kim, Jung Oh
Lee, Seung Min
Park, Hana
Lee, Ju Ho
Rim, Kyu Sung
Hwang, Seong Gyu
Kim, Nam Keun
author_facet Kim, Mi Na
Kim, Jung Oh
Lee, Seung Min
Park, Hana
Lee, Ju Ho
Rim, Kyu Sung
Hwang, Seong Gyu
Kim, Nam Keun
author_sort Kim, Mi Na
collection PubMed
description Single-nucleotide polymorphisms (SNPs) in microRNA machinery genes might affect microRNA processing and subsequently impact tumorigenesis. The aim of this study was to investigate the associations between SNPs in microRNA machinery genes and hepatocellular carcinoma (HCC) in a Korean population. Genotyping of six SNPs in microRNA machinery genes was performed using blood samples from 147 patients with HCC and 209 healthy control subjects. None of the six SNPs in microRNA machinery genes were significantly associated with HCC development. However, among the models for six polymorphic loci—DICER (rs3742330 and rs13078), DROSHA (rs10719 and rs6877842), RAN (rs14035) and XPO5 (rs11077)—one allele combination (A-A-T-C-C-C) showed synergistic effects in terms of an increased risk of HCC development (odds ratio = 8.881, 95% confidence interval [CI] = 1.889–41.750; P = 0.002). Multivariate Cox proportional hazard regression analysis showed a significant survival benefit for the DICER rs3742330 GG compared with the AA type (hazard ratio [HR], 0.314; 95% CI, 0.135–0.730; P = 0.007) and for the RAN rs14035 CT compared with the CC genotype (HR, 0.587; 95% CI, 0.349–0.987; P = 0.044). Although we found no direct association between DICER (rs3742330 and rs13078), DROSHA (rs10719 and rs6877842), RAN (rs14035) or XPO5 (rs11077) polymorphisms and HCC risk, we demonstrated that DICER (rs3742330) and RAN (rs14035) were associated with the survival of HCC patients. Future studies with larger samples are needed to determine associations of SNPs in microRNA machinery genes with HCC risk and prognosis.
format Online
Article
Text
id pubmed-5017754
institution National Center for Biotechnology Information
language English
publishDate 2016
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-50177542016-09-27 Variation in the Dicer and RAN Genes Are Associated with Survival in Patients with Hepatocellular Carcinoma Kim, Mi Na Kim, Jung Oh Lee, Seung Min Park, Hana Lee, Ju Ho Rim, Kyu Sung Hwang, Seong Gyu Kim, Nam Keun PLoS One Research Article Single-nucleotide polymorphisms (SNPs) in microRNA machinery genes might affect microRNA processing and subsequently impact tumorigenesis. The aim of this study was to investigate the associations between SNPs in microRNA machinery genes and hepatocellular carcinoma (HCC) in a Korean population. Genotyping of six SNPs in microRNA machinery genes was performed using blood samples from 147 patients with HCC and 209 healthy control subjects. None of the six SNPs in microRNA machinery genes were significantly associated with HCC development. However, among the models for six polymorphic loci—DICER (rs3742330 and rs13078), DROSHA (rs10719 and rs6877842), RAN (rs14035) and XPO5 (rs11077)—one allele combination (A-A-T-C-C-C) showed synergistic effects in terms of an increased risk of HCC development (odds ratio = 8.881, 95% confidence interval [CI] = 1.889–41.750; P = 0.002). Multivariate Cox proportional hazard regression analysis showed a significant survival benefit for the DICER rs3742330 GG compared with the AA type (hazard ratio [HR], 0.314; 95% CI, 0.135–0.730; P = 0.007) and for the RAN rs14035 CT compared with the CC genotype (HR, 0.587; 95% CI, 0.349–0.987; P = 0.044). Although we found no direct association between DICER (rs3742330 and rs13078), DROSHA (rs10719 and rs6877842), RAN (rs14035) or XPO5 (rs11077) polymorphisms and HCC risk, we demonstrated that DICER (rs3742330) and RAN (rs14035) were associated with the survival of HCC patients. Future studies with larger samples are needed to determine associations of SNPs in microRNA machinery genes with HCC risk and prognosis. Public Library of Science 2016-09-09 /pmc/articles/PMC5017754/ /pubmed/27611467 http://dx.doi.org/10.1371/journal.pone.0162279 Text en © 2016 Kim et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Kim, Mi Na
Kim, Jung Oh
Lee, Seung Min
Park, Hana
Lee, Ju Ho
Rim, Kyu Sung
Hwang, Seong Gyu
Kim, Nam Keun
Variation in the Dicer and RAN Genes Are Associated with Survival in Patients with Hepatocellular Carcinoma
title Variation in the Dicer and RAN Genes Are Associated with Survival in Patients with Hepatocellular Carcinoma
title_full Variation in the Dicer and RAN Genes Are Associated with Survival in Patients with Hepatocellular Carcinoma
title_fullStr Variation in the Dicer and RAN Genes Are Associated with Survival in Patients with Hepatocellular Carcinoma
title_full_unstemmed Variation in the Dicer and RAN Genes Are Associated with Survival in Patients with Hepatocellular Carcinoma
title_short Variation in the Dicer and RAN Genes Are Associated with Survival in Patients with Hepatocellular Carcinoma
title_sort variation in the dicer and ran genes are associated with survival in patients with hepatocellular carcinoma
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5017754/
https://www.ncbi.nlm.nih.gov/pubmed/27611467
http://dx.doi.org/10.1371/journal.pone.0162279
work_keys_str_mv AT kimmina variationinthedicerandrangenesareassociatedwithsurvivalinpatientswithhepatocellularcarcinoma
AT kimjungoh variationinthedicerandrangenesareassociatedwithsurvivalinpatientswithhepatocellularcarcinoma
AT leeseungmin variationinthedicerandrangenesareassociatedwithsurvivalinpatientswithhepatocellularcarcinoma
AT parkhana variationinthedicerandrangenesareassociatedwithsurvivalinpatientswithhepatocellularcarcinoma
AT leejuho variationinthedicerandrangenesareassociatedwithsurvivalinpatientswithhepatocellularcarcinoma
AT rimkyusung variationinthedicerandrangenesareassociatedwithsurvivalinpatientswithhepatocellularcarcinoma
AT hwangseonggyu variationinthedicerandrangenesareassociatedwithsurvivalinpatientswithhepatocellularcarcinoma
AT kimnamkeun variationinthedicerandrangenesareassociatedwithsurvivalinpatientswithhepatocellularcarcinoma