Cargando…
Rhodopsin 7–The unusual Rhodopsin in Drosophila
Rhodopsins are the major photopigments in the fruit fly Drosophila melanogaster. Drosophila express six well-characterized Rhodopsins (Rh1–Rh6) with distinct absorption maxima and expression pattern. In 2000, when the Drosophila genome was published, a novel Rhodopsin gene was discovered: Rhodopsin...
Autores principales: | , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PeerJ Inc.
2016
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5018682/ https://www.ncbi.nlm.nih.gov/pubmed/27651995 http://dx.doi.org/10.7717/peerj.2427 |
_version_ | 1782452955552677888 |
---|---|
author | Senthilan, Pingkalai R. Helfrich-Förster, Charlotte |
author_facet | Senthilan, Pingkalai R. Helfrich-Förster, Charlotte |
author_sort | Senthilan, Pingkalai R. |
collection | PubMed |
description | Rhodopsins are the major photopigments in the fruit fly Drosophila melanogaster. Drosophila express six well-characterized Rhodopsins (Rh1–Rh6) with distinct absorption maxima and expression pattern. In 2000, when the Drosophila genome was published, a novel Rhodopsin gene was discovered: Rhodopsin 7 (Rh7). Rh7 is highly conserved among the Drosophila genus and is also found in other arthropods. Phylogenetic trees based on protein sequences suggest that the seven Drosophila Rhodopsins cluster in three different groups. While Rh1, Rh2 and Rh6 form a “vertebrate-melanopsin-type”–cluster, and Rh3, Rh4 and Rh5 form an “insect-type”-Rhodopsin cluster, Rh7 seem to form its own cluster. Although Rh7 has nearly all important features of a functional Rhodopsin, it differs from other Rhodopsins in its genomic and structural properties, suggesting it might have an overall different role than other known Rhodopsins. |
format | Online Article Text |
id | pubmed-5018682 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | PeerJ Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-50186822016-09-20 Rhodopsin 7–The unusual Rhodopsin in Drosophila Senthilan, Pingkalai R. Helfrich-Förster, Charlotte PeerJ Bioinformatics Rhodopsins are the major photopigments in the fruit fly Drosophila melanogaster. Drosophila express six well-characterized Rhodopsins (Rh1–Rh6) with distinct absorption maxima and expression pattern. In 2000, when the Drosophila genome was published, a novel Rhodopsin gene was discovered: Rhodopsin 7 (Rh7). Rh7 is highly conserved among the Drosophila genus and is also found in other arthropods. Phylogenetic trees based on protein sequences suggest that the seven Drosophila Rhodopsins cluster in three different groups. While Rh1, Rh2 and Rh6 form a “vertebrate-melanopsin-type”–cluster, and Rh3, Rh4 and Rh5 form an “insect-type”-Rhodopsin cluster, Rh7 seem to form its own cluster. Although Rh7 has nearly all important features of a functional Rhodopsin, it differs from other Rhodopsins in its genomic and structural properties, suggesting it might have an overall different role than other known Rhodopsins. PeerJ Inc. 2016-09-06 /pmc/articles/PMC5018682/ /pubmed/27651995 http://dx.doi.org/10.7717/peerj.2427 Text en © 2016 Senthilan & Helfrich-Förster http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited. |
spellingShingle | Bioinformatics Senthilan, Pingkalai R. Helfrich-Förster, Charlotte Rhodopsin 7–The unusual Rhodopsin in Drosophila |
title | Rhodopsin 7–The unusual Rhodopsin in Drosophila |
title_full | Rhodopsin 7–The unusual Rhodopsin in Drosophila |
title_fullStr | Rhodopsin 7–The unusual Rhodopsin in Drosophila |
title_full_unstemmed | Rhodopsin 7–The unusual Rhodopsin in Drosophila |
title_short | Rhodopsin 7–The unusual Rhodopsin in Drosophila |
title_sort | rhodopsin 7–the unusual rhodopsin in drosophila |
topic | Bioinformatics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5018682/ https://www.ncbi.nlm.nih.gov/pubmed/27651995 http://dx.doi.org/10.7717/peerj.2427 |
work_keys_str_mv | AT senthilanpingkalair rhodopsin7theunusualrhodopsinindrosophila AT helfrichforstercharlotte rhodopsin7theunusualrhodopsinindrosophila |