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Rhodopsin 7–The unusual Rhodopsin in Drosophila

Rhodopsins are the major photopigments in the fruit fly Drosophila melanogaster. Drosophila express six well-characterized Rhodopsins (Rh1–Rh6) with distinct absorption maxima and expression pattern. In 2000, when the Drosophila genome was published, a novel Rhodopsin gene was discovered: Rhodopsin...

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Autores principales: Senthilan, Pingkalai R., Helfrich-Förster, Charlotte
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5018682/
https://www.ncbi.nlm.nih.gov/pubmed/27651995
http://dx.doi.org/10.7717/peerj.2427
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author Senthilan, Pingkalai R.
Helfrich-Förster, Charlotte
author_facet Senthilan, Pingkalai R.
Helfrich-Förster, Charlotte
author_sort Senthilan, Pingkalai R.
collection PubMed
description Rhodopsins are the major photopigments in the fruit fly Drosophila melanogaster. Drosophila express six well-characterized Rhodopsins (Rh1–Rh6) with distinct absorption maxima and expression pattern. In 2000, when the Drosophila genome was published, a novel Rhodopsin gene was discovered: Rhodopsin 7 (Rh7). Rh7 is highly conserved among the Drosophila genus and is also found in other arthropods. Phylogenetic trees based on protein sequences suggest that the seven Drosophila Rhodopsins cluster in three different groups. While Rh1, Rh2 and Rh6 form a “vertebrate-melanopsin-type”–cluster, and Rh3, Rh4 and Rh5 form an “insect-type”-Rhodopsin cluster, Rh7 seem to form its own cluster. Although Rh7 has nearly all important features of a functional Rhodopsin, it differs from other Rhodopsins in its genomic and structural properties, suggesting it might have an overall different role than other known Rhodopsins.
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spelling pubmed-50186822016-09-20 Rhodopsin 7–The unusual Rhodopsin in Drosophila Senthilan, Pingkalai R. Helfrich-Förster, Charlotte PeerJ Bioinformatics Rhodopsins are the major photopigments in the fruit fly Drosophila melanogaster. Drosophila express six well-characterized Rhodopsins (Rh1–Rh6) with distinct absorption maxima and expression pattern. In 2000, when the Drosophila genome was published, a novel Rhodopsin gene was discovered: Rhodopsin 7 (Rh7). Rh7 is highly conserved among the Drosophila genus and is also found in other arthropods. Phylogenetic trees based on protein sequences suggest that the seven Drosophila Rhodopsins cluster in three different groups. While Rh1, Rh2 and Rh6 form a “vertebrate-melanopsin-type”–cluster, and Rh3, Rh4 and Rh5 form an “insect-type”-Rhodopsin cluster, Rh7 seem to form its own cluster. Although Rh7 has nearly all important features of a functional Rhodopsin, it differs from other Rhodopsins in its genomic and structural properties, suggesting it might have an overall different role than other known Rhodopsins. PeerJ Inc. 2016-09-06 /pmc/articles/PMC5018682/ /pubmed/27651995 http://dx.doi.org/10.7717/peerj.2427 Text en © 2016 Senthilan & Helfrich-Förster http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited.
spellingShingle Bioinformatics
Senthilan, Pingkalai R.
Helfrich-Förster, Charlotte
Rhodopsin 7–The unusual Rhodopsin in Drosophila
title Rhodopsin 7–The unusual Rhodopsin in Drosophila
title_full Rhodopsin 7–The unusual Rhodopsin in Drosophila
title_fullStr Rhodopsin 7–The unusual Rhodopsin in Drosophila
title_full_unstemmed Rhodopsin 7–The unusual Rhodopsin in Drosophila
title_short Rhodopsin 7–The unusual Rhodopsin in Drosophila
title_sort rhodopsin 7–the unusual rhodopsin in drosophila
topic Bioinformatics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5018682/
https://www.ncbi.nlm.nih.gov/pubmed/27651995
http://dx.doi.org/10.7717/peerj.2427
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