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The prevalence and distribution of the amyloidogenic transthyretin (TTR) V122I allele in Africa

BACKGROUND: Transthyretin (TTR) pV142I (rs76992529‐A) is one of the 113 variants in the human TTR gene associated with systemic amyloidosis. It results from a G to A transition at a CG dinucleotide in the codon for amino acid 122 of the mature protein (TTR V122I). The allele frequency is 0.0173 in A...

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Autores principales: Jacobson, Daniel R., Alexander, Alice A., Tagoe, Clement, Garvey, W. T., Williams, Scott M., Tishkoff, Sara, Modiano, David, Sirima, Sodiomon B., Kalidi, Issa, Toure, Amadou, Buxbaum, Joel N.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5023940/
https://www.ncbi.nlm.nih.gov/pubmed/27652282
http://dx.doi.org/10.1002/mgg3.231
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author Jacobson, Daniel R.
Alexander, Alice A.
Tagoe, Clement
Garvey, W. T.
Williams, Scott M.
Tishkoff, Sara
Modiano, David
Sirima, Sodiomon B.
Kalidi, Issa
Toure, Amadou
Buxbaum, Joel N.
author_facet Jacobson, Daniel R.
Alexander, Alice A.
Tagoe, Clement
Garvey, W. T.
Williams, Scott M.
Tishkoff, Sara
Modiano, David
Sirima, Sodiomon B.
Kalidi, Issa
Toure, Amadou
Buxbaum, Joel N.
author_sort Jacobson, Daniel R.
collection PubMed
description BACKGROUND: Transthyretin (TTR) pV142I (rs76992529‐A) is one of the 113 variants in the human TTR gene associated with systemic amyloidosis. It results from a G to A transition at a CG dinucleotide in the codon for amino acid 122 of the mature protein (TTR V122I). The allele frequency is 0.0173 in African Americans. METHODS: PCR‐based assays to genotype 2767 DNA samples obtained from participants in genetic studies from various African populations supplemented with sequencing data from 529 samples within the 1000 Genomes Project. RESULTS: The rs76992529‐A variant allele was most prevalent (allele frequency 0.0253) in the contiguous West African countries of Sierra Leone, Guinea, Ivory Coast, Burkina Faso, Ghana, and Nigeria. In other African countries, the mean allele frequency was 0.011. CONCLUSIONS: Our data are consistent with a small number of founder carriers of the amyloidogenic TTR V122I (p.Val142Ile) allele in southern West Africa, with no apparent advantage or disadvantage of an allele carrying newborn reaching adulthood. In U.S. African Americans, the allele represents a significant risk for congestive heart failure late in life. If clinical penetrance is similar in African countries with high allele frequencies, then cardiac amyloidosis could also represent a significant cause of heart disease in the elderly in those populations.
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spelling pubmed-50239402016-09-20 The prevalence and distribution of the amyloidogenic transthyretin (TTR) V122I allele in Africa Jacobson, Daniel R. Alexander, Alice A. Tagoe, Clement Garvey, W. T. Williams, Scott M. Tishkoff, Sara Modiano, David Sirima, Sodiomon B. Kalidi, Issa Toure, Amadou Buxbaum, Joel N. Mol Genet Genomic Med Original Articles BACKGROUND: Transthyretin (TTR) pV142I (rs76992529‐A) is one of the 113 variants in the human TTR gene associated with systemic amyloidosis. It results from a G to A transition at a CG dinucleotide in the codon for amino acid 122 of the mature protein (TTR V122I). The allele frequency is 0.0173 in African Americans. METHODS: PCR‐based assays to genotype 2767 DNA samples obtained from participants in genetic studies from various African populations supplemented with sequencing data from 529 samples within the 1000 Genomes Project. RESULTS: The rs76992529‐A variant allele was most prevalent (allele frequency 0.0253) in the contiguous West African countries of Sierra Leone, Guinea, Ivory Coast, Burkina Faso, Ghana, and Nigeria. In other African countries, the mean allele frequency was 0.011. CONCLUSIONS: Our data are consistent with a small number of founder carriers of the amyloidogenic TTR V122I (p.Val142Ile) allele in southern West Africa, with no apparent advantage or disadvantage of an allele carrying newborn reaching adulthood. In U.S. African Americans, the allele represents a significant risk for congestive heart failure late in life. If clinical penetrance is similar in African countries with high allele frequencies, then cardiac amyloidosis could also represent a significant cause of heart disease in the elderly in those populations. John Wiley and Sons Inc. 2016-07-14 /pmc/articles/PMC5023940/ /pubmed/27652282 http://dx.doi.org/10.1002/mgg3.231 Text en © 2016 The Authors. Molecular Genetics & Genomic Medicine published by Wiley Periodicals, Inc. This is an open access article under the terms of the Creative Commons Attribution (http://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Articles
Jacobson, Daniel R.
Alexander, Alice A.
Tagoe, Clement
Garvey, W. T.
Williams, Scott M.
Tishkoff, Sara
Modiano, David
Sirima, Sodiomon B.
Kalidi, Issa
Toure, Amadou
Buxbaum, Joel N.
The prevalence and distribution of the amyloidogenic transthyretin (TTR) V122I allele in Africa
title The prevalence and distribution of the amyloidogenic transthyretin (TTR) V122I allele in Africa
title_full The prevalence and distribution of the amyloidogenic transthyretin (TTR) V122I allele in Africa
title_fullStr The prevalence and distribution of the amyloidogenic transthyretin (TTR) V122I allele in Africa
title_full_unstemmed The prevalence and distribution of the amyloidogenic transthyretin (TTR) V122I allele in Africa
title_short The prevalence and distribution of the amyloidogenic transthyretin (TTR) V122I allele in Africa
title_sort prevalence and distribution of the amyloidogenic transthyretin (ttr) v122i allele in africa
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5023940/
https://www.ncbi.nlm.nih.gov/pubmed/27652282
http://dx.doi.org/10.1002/mgg3.231
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