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Zonula occludens toxins and their prophages in Campylobacter species
BACKGROUND: We previously showed that zonula occludens toxin (Zot) encoded by Campylobacter concisus zot(808T) gene has the potential to initiate inflammatory bowel disease. This Zot protein caused prolonged intestinal epithelial barrier damage, induced intestinal epithelial and macrophage productio...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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BioMed Central
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5025632/ https://www.ncbi.nlm.nih.gov/pubmed/27651834 http://dx.doi.org/10.1186/s13099-016-0125-1 |
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author | Liu, Fang Lee, Hoyul Lan, Ruiting Zhang, Li |
author_facet | Liu, Fang Lee, Hoyul Lan, Ruiting Zhang, Li |
author_sort | Liu, Fang |
collection | PubMed |
description | BACKGROUND: We previously showed that zonula occludens toxin (Zot) encoded by Campylobacter concisus zot(808T) gene has the potential to initiate inflammatory bowel disease. This Zot protein caused prolonged intestinal epithelial barrier damage, induced intestinal epithelial and macrophage production of tumor necrosis factor-α and enhanced the responses of macrophages to other microbes. In order to understand the potential virulence of Zot proteins in other Campylobacter species, in this study we examined their presence, similarities, motifs and prophages. METHODS: The presence of Zot proteins in Campylobacter species was examined by searching for the Zot family domain in multiple protein databases. Walker A and Walker B motifs in Zot proteins were identified using protein sequence alignment. A phylogenetic tree based on Campylobacter zot genes was constructed using maximum-likelihood method. Campylobacter Zot proteins were compared using protein sequence alignment. The zot-containing prophages in Campylobacter species were identified and compared with known prophage proteins and other viral proteins using protein sequence alignment and protein BLAST. RESULTS: Twelve Zot proteins were found in nine Campylobacter species/subspecies. Among these Campylobacter species, three species had two Zot proteins and the remaining six species/subspecies had one Zot protein. Walker A and Walker B motifs and a transmembrane domain were found in all identified Campylobacter Zot proteins. The twelve Campylobacter zot genes from the nine Campylobacter species/subspecies formed two clusters. The Zot(CampyType_1) proteins encoded by Cluster 1 Campylobacter zot genes showed high similarities to each other. However, Zot(CampyType_2) proteins encoded by Cluster 2 Campylobacter zot genes were more diverse. Furthermore, the zot-containing Campylobacter prophages were identified. CONCLUSION: This study reports the identification of two types of Campylobacter Zot proteins. The high similarities of Zot(CampyType_1) proteins suggest that they are likely to have similar virulence. Zot(CampyType_2) proteins are less similar to each other and their virulent properties, if any, remain to be examined individually. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s13099-016-0125-1) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-5025632 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-50256322016-09-20 Zonula occludens toxins and their prophages in Campylobacter species Liu, Fang Lee, Hoyul Lan, Ruiting Zhang, Li Gut Pathog Research BACKGROUND: We previously showed that zonula occludens toxin (Zot) encoded by Campylobacter concisus zot(808T) gene has the potential to initiate inflammatory bowel disease. This Zot protein caused prolonged intestinal epithelial barrier damage, induced intestinal epithelial and macrophage production of tumor necrosis factor-α and enhanced the responses of macrophages to other microbes. In order to understand the potential virulence of Zot proteins in other Campylobacter species, in this study we examined their presence, similarities, motifs and prophages. METHODS: The presence of Zot proteins in Campylobacter species was examined by searching for the Zot family domain in multiple protein databases. Walker A and Walker B motifs in Zot proteins were identified using protein sequence alignment. A phylogenetic tree based on Campylobacter zot genes was constructed using maximum-likelihood method. Campylobacter Zot proteins were compared using protein sequence alignment. The zot-containing prophages in Campylobacter species were identified and compared with known prophage proteins and other viral proteins using protein sequence alignment and protein BLAST. RESULTS: Twelve Zot proteins were found in nine Campylobacter species/subspecies. Among these Campylobacter species, three species had two Zot proteins and the remaining six species/subspecies had one Zot protein. Walker A and Walker B motifs and a transmembrane domain were found in all identified Campylobacter Zot proteins. The twelve Campylobacter zot genes from the nine Campylobacter species/subspecies formed two clusters. The Zot(CampyType_1) proteins encoded by Cluster 1 Campylobacter zot genes showed high similarities to each other. However, Zot(CampyType_2) proteins encoded by Cluster 2 Campylobacter zot genes were more diverse. Furthermore, the zot-containing Campylobacter prophages were identified. CONCLUSION: This study reports the identification of two types of Campylobacter Zot proteins. The high similarities of Zot(CampyType_1) proteins suggest that they are likely to have similar virulence. Zot(CampyType_2) proteins are less similar to each other and their virulent properties, if any, remain to be examined individually. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s13099-016-0125-1) contains supplementary material, which is available to authorized users. BioMed Central 2016-09-15 /pmc/articles/PMC5025632/ /pubmed/27651834 http://dx.doi.org/10.1186/s13099-016-0125-1 Text en © The Author(s) 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Liu, Fang Lee, Hoyul Lan, Ruiting Zhang, Li Zonula occludens toxins and their prophages in Campylobacter species |
title | Zonula occludens toxins and their prophages in Campylobacter species |
title_full | Zonula occludens toxins and their prophages in Campylobacter species |
title_fullStr | Zonula occludens toxins and their prophages in Campylobacter species |
title_full_unstemmed | Zonula occludens toxins and their prophages in Campylobacter species |
title_short | Zonula occludens toxins and their prophages in Campylobacter species |
title_sort | zonula occludens toxins and their prophages in campylobacter species |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5025632/ https://www.ncbi.nlm.nih.gov/pubmed/27651834 http://dx.doi.org/10.1186/s13099-016-0125-1 |
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