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External cavity-quantum cascade laser infrared spectroscopy for secondary structure analysis of proteins at low concentrations

Fourier transform infrared (FTIR) and circular dichroism (CD) spectroscopy are analytical techniques employed for the analysis of protein secondary structure. The use of CD spectroscopy is limited to low protein concentrations (<2 mg ml(−1)), while FTIR spectroscopy is commonly used in a higher c...

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Autores principales: Schwaighofer, Andreas, Alcaráz, Mirta R., Araman, Can, Goicoechea, Héctor, Lendl, Bernhard
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5025714/
https://www.ncbi.nlm.nih.gov/pubmed/27633337
http://dx.doi.org/10.1038/srep33556
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author Schwaighofer, Andreas
Alcaráz, Mirta R.
Araman, Can
Goicoechea, Héctor
Lendl, Bernhard
author_facet Schwaighofer, Andreas
Alcaráz, Mirta R.
Araman, Can
Goicoechea, Héctor
Lendl, Bernhard
author_sort Schwaighofer, Andreas
collection PubMed
description Fourier transform infrared (FTIR) and circular dichroism (CD) spectroscopy are analytical techniques employed for the analysis of protein secondary structure. The use of CD spectroscopy is limited to low protein concentrations (<2 mg ml(−1)), while FTIR spectroscopy is commonly used in a higher concentration range (>5 mg ml(−1)). Here we introduce a quantum cascade laser (QCL)-based IR transmission setup for analysis of protein and polypeptide secondary structure at concentrations as low as 0.25 mg ml(−1) in deuterated buffer solution. We present dynamic QCL-IR spectra of the temperature-induced α-helix to β-sheet transition of poly-L-lysine. The concentration dependence of the α-β transition temperature between 0.25 and 10 mg ml(−1) was investigated by QCL-IR, FTIR and CD spectroscopy. By using QCL-IR spectroscopy it is possible to perform IR spectroscopic analysis in the same concentration range as CD spectroscopy, thus enabling a combined analysis of biomolecules secondary structure by CD and IR spectroscopy.
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spelling pubmed-50257142016-09-22 External cavity-quantum cascade laser infrared spectroscopy for secondary structure analysis of proteins at low concentrations Schwaighofer, Andreas Alcaráz, Mirta R. Araman, Can Goicoechea, Héctor Lendl, Bernhard Sci Rep Article Fourier transform infrared (FTIR) and circular dichroism (CD) spectroscopy are analytical techniques employed for the analysis of protein secondary structure. The use of CD spectroscopy is limited to low protein concentrations (<2 mg ml(−1)), while FTIR spectroscopy is commonly used in a higher concentration range (>5 mg ml(−1)). Here we introduce a quantum cascade laser (QCL)-based IR transmission setup for analysis of protein and polypeptide secondary structure at concentrations as low as 0.25 mg ml(−1) in deuterated buffer solution. We present dynamic QCL-IR spectra of the temperature-induced α-helix to β-sheet transition of poly-L-lysine. The concentration dependence of the α-β transition temperature between 0.25 and 10 mg ml(−1) was investigated by QCL-IR, FTIR and CD spectroscopy. By using QCL-IR spectroscopy it is possible to perform IR spectroscopic analysis in the same concentration range as CD spectroscopy, thus enabling a combined analysis of biomolecules secondary structure by CD and IR spectroscopy. Nature Publishing Group 2016-09-16 /pmc/articles/PMC5025714/ /pubmed/27633337 http://dx.doi.org/10.1038/srep33556 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Schwaighofer, Andreas
Alcaráz, Mirta R.
Araman, Can
Goicoechea, Héctor
Lendl, Bernhard
External cavity-quantum cascade laser infrared spectroscopy for secondary structure analysis of proteins at low concentrations
title External cavity-quantum cascade laser infrared spectroscopy for secondary structure analysis of proteins at low concentrations
title_full External cavity-quantum cascade laser infrared spectroscopy for secondary structure analysis of proteins at low concentrations
title_fullStr External cavity-quantum cascade laser infrared spectroscopy for secondary structure analysis of proteins at low concentrations
title_full_unstemmed External cavity-quantum cascade laser infrared spectroscopy for secondary structure analysis of proteins at low concentrations
title_short External cavity-quantum cascade laser infrared spectroscopy for secondary structure analysis of proteins at low concentrations
title_sort external cavity-quantum cascade laser infrared spectroscopy for secondary structure analysis of proteins at low concentrations
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5025714/
https://www.ncbi.nlm.nih.gov/pubmed/27633337
http://dx.doi.org/10.1038/srep33556
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