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External cavity-quantum cascade laser infrared spectroscopy for secondary structure analysis of proteins at low concentrations
Fourier transform infrared (FTIR) and circular dichroism (CD) spectroscopy are analytical techniques employed for the analysis of protein secondary structure. The use of CD spectroscopy is limited to low protein concentrations (<2 mg ml(−1)), while FTIR spectroscopy is commonly used in a higher c...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5025714/ https://www.ncbi.nlm.nih.gov/pubmed/27633337 http://dx.doi.org/10.1038/srep33556 |
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author | Schwaighofer, Andreas Alcaráz, Mirta R. Araman, Can Goicoechea, Héctor Lendl, Bernhard |
author_facet | Schwaighofer, Andreas Alcaráz, Mirta R. Araman, Can Goicoechea, Héctor Lendl, Bernhard |
author_sort | Schwaighofer, Andreas |
collection | PubMed |
description | Fourier transform infrared (FTIR) and circular dichroism (CD) spectroscopy are analytical techniques employed for the analysis of protein secondary structure. The use of CD spectroscopy is limited to low protein concentrations (<2 mg ml(−1)), while FTIR spectroscopy is commonly used in a higher concentration range (>5 mg ml(−1)). Here we introduce a quantum cascade laser (QCL)-based IR transmission setup for analysis of protein and polypeptide secondary structure at concentrations as low as 0.25 mg ml(−1) in deuterated buffer solution. We present dynamic QCL-IR spectra of the temperature-induced α-helix to β-sheet transition of poly-L-lysine. The concentration dependence of the α-β transition temperature between 0.25 and 10 mg ml(−1) was investigated by QCL-IR, FTIR and CD spectroscopy. By using QCL-IR spectroscopy it is possible to perform IR spectroscopic analysis in the same concentration range as CD spectroscopy, thus enabling a combined analysis of biomolecules secondary structure by CD and IR spectroscopy. |
format | Online Article Text |
id | pubmed-5025714 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-50257142016-09-22 External cavity-quantum cascade laser infrared spectroscopy for secondary structure analysis of proteins at low concentrations Schwaighofer, Andreas Alcaráz, Mirta R. Araman, Can Goicoechea, Héctor Lendl, Bernhard Sci Rep Article Fourier transform infrared (FTIR) and circular dichroism (CD) spectroscopy are analytical techniques employed for the analysis of protein secondary structure. The use of CD spectroscopy is limited to low protein concentrations (<2 mg ml(−1)), while FTIR spectroscopy is commonly used in a higher concentration range (>5 mg ml(−1)). Here we introduce a quantum cascade laser (QCL)-based IR transmission setup for analysis of protein and polypeptide secondary structure at concentrations as low as 0.25 mg ml(−1) in deuterated buffer solution. We present dynamic QCL-IR spectra of the temperature-induced α-helix to β-sheet transition of poly-L-lysine. The concentration dependence of the α-β transition temperature between 0.25 and 10 mg ml(−1) was investigated by QCL-IR, FTIR and CD spectroscopy. By using QCL-IR spectroscopy it is possible to perform IR spectroscopic analysis in the same concentration range as CD spectroscopy, thus enabling a combined analysis of biomolecules secondary structure by CD and IR spectroscopy. Nature Publishing Group 2016-09-16 /pmc/articles/PMC5025714/ /pubmed/27633337 http://dx.doi.org/10.1038/srep33556 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Schwaighofer, Andreas Alcaráz, Mirta R. Araman, Can Goicoechea, Héctor Lendl, Bernhard External cavity-quantum cascade laser infrared spectroscopy for secondary structure analysis of proteins at low concentrations |
title | External cavity-quantum cascade laser infrared spectroscopy for secondary structure analysis of proteins at low concentrations |
title_full | External cavity-quantum cascade laser infrared spectroscopy for secondary structure analysis of proteins at low concentrations |
title_fullStr | External cavity-quantum cascade laser infrared spectroscopy for secondary structure analysis of proteins at low concentrations |
title_full_unstemmed | External cavity-quantum cascade laser infrared spectroscopy for secondary structure analysis of proteins at low concentrations |
title_short | External cavity-quantum cascade laser infrared spectroscopy for secondary structure analysis of proteins at low concentrations |
title_sort | external cavity-quantum cascade laser infrared spectroscopy for secondary structure analysis of proteins at low concentrations |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5025714/ https://www.ncbi.nlm.nih.gov/pubmed/27633337 http://dx.doi.org/10.1038/srep33556 |
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