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Driving forces of soil bacterial community structure, diversity, and function in temperate grasslands and forests
Soil bacteria provide a large range of ecosystem services such as nutrient cycling. Despite their important role in soil systems, compositional and functional responses of bacterial communities to different land use and management regimes are not fully understood. Here, we assessed soil bacterial co...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5030646/ https://www.ncbi.nlm.nih.gov/pubmed/27650273 http://dx.doi.org/10.1038/srep33696 |
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author | Kaiser, Kristin Wemheuer, Bernd Korolkow, Vera Wemheuer, Franziska Nacke, Heiko Schöning, Ingo Schrumpf, Marion Daniel, Rolf |
author_facet | Kaiser, Kristin Wemheuer, Bernd Korolkow, Vera Wemheuer, Franziska Nacke, Heiko Schöning, Ingo Schrumpf, Marion Daniel, Rolf |
author_sort | Kaiser, Kristin |
collection | PubMed |
description | Soil bacteria provide a large range of ecosystem services such as nutrient cycling. Despite their important role in soil systems, compositional and functional responses of bacterial communities to different land use and management regimes are not fully understood. Here, we assessed soil bacterial communities in 150 forest and 150 grassland soils derived from three German regions by pyrotag sequencing of 16S rRNA genes. Land use type (forest and grassland) and soil edaphic properties strongly affected bacterial community structure and function, whereas management regime had a minor effect. In addition, a separation of soil bacterial communities by sampling region was encountered. Soil pH was the best predictor for bacterial community structure, diversity and function. The application of multinomial log-linear models revealed distinct responses of abundant bacterial groups towards pH. Predicted functional profiles revealed that differences in land use not only select for distinct bacterial populations but also for specific functional traits. The combination of 16S rRNA data and corresponding functional profiles provided comprehensive insights into compositional and functional adaptations to changing environmental conditions associated with differences in land use and management. |
format | Online Article Text |
id | pubmed-5030646 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-50306462016-09-26 Driving forces of soil bacterial community structure, diversity, and function in temperate grasslands and forests Kaiser, Kristin Wemheuer, Bernd Korolkow, Vera Wemheuer, Franziska Nacke, Heiko Schöning, Ingo Schrumpf, Marion Daniel, Rolf Sci Rep Article Soil bacteria provide a large range of ecosystem services such as nutrient cycling. Despite their important role in soil systems, compositional and functional responses of bacterial communities to different land use and management regimes are not fully understood. Here, we assessed soil bacterial communities in 150 forest and 150 grassland soils derived from three German regions by pyrotag sequencing of 16S rRNA genes. Land use type (forest and grassland) and soil edaphic properties strongly affected bacterial community structure and function, whereas management regime had a minor effect. In addition, a separation of soil bacterial communities by sampling region was encountered. Soil pH was the best predictor for bacterial community structure, diversity and function. The application of multinomial log-linear models revealed distinct responses of abundant bacterial groups towards pH. Predicted functional profiles revealed that differences in land use not only select for distinct bacterial populations but also for specific functional traits. The combination of 16S rRNA data and corresponding functional profiles provided comprehensive insights into compositional and functional adaptations to changing environmental conditions associated with differences in land use and management. Nature Publishing Group 2016-09-21 /pmc/articles/PMC5030646/ /pubmed/27650273 http://dx.doi.org/10.1038/srep33696 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Kaiser, Kristin Wemheuer, Bernd Korolkow, Vera Wemheuer, Franziska Nacke, Heiko Schöning, Ingo Schrumpf, Marion Daniel, Rolf Driving forces of soil bacterial community structure, diversity, and function in temperate grasslands and forests |
title | Driving forces of soil bacterial community structure, diversity, and function in temperate grasslands and forests |
title_full | Driving forces of soil bacterial community structure, diversity, and function in temperate grasslands and forests |
title_fullStr | Driving forces of soil bacterial community structure, diversity, and function in temperate grasslands and forests |
title_full_unstemmed | Driving forces of soil bacterial community structure, diversity, and function in temperate grasslands and forests |
title_short | Driving forces of soil bacterial community structure, diversity, and function in temperate grasslands and forests |
title_sort | driving forces of soil bacterial community structure, diversity, and function in temperate grasslands and forests |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5030646/ https://www.ncbi.nlm.nih.gov/pubmed/27650273 http://dx.doi.org/10.1038/srep33696 |
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