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Driving forces of soil bacterial community structure, diversity, and function in temperate grasslands and forests

Soil bacteria provide a large range of ecosystem services such as nutrient cycling. Despite their important role in soil systems, compositional and functional responses of bacterial communities to different land use and management regimes are not fully understood. Here, we assessed soil bacterial co...

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Autores principales: Kaiser, Kristin, Wemheuer, Bernd, Korolkow, Vera, Wemheuer, Franziska, Nacke, Heiko, Schöning, Ingo, Schrumpf, Marion, Daniel, Rolf
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5030646/
https://www.ncbi.nlm.nih.gov/pubmed/27650273
http://dx.doi.org/10.1038/srep33696
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author Kaiser, Kristin
Wemheuer, Bernd
Korolkow, Vera
Wemheuer, Franziska
Nacke, Heiko
Schöning, Ingo
Schrumpf, Marion
Daniel, Rolf
author_facet Kaiser, Kristin
Wemheuer, Bernd
Korolkow, Vera
Wemheuer, Franziska
Nacke, Heiko
Schöning, Ingo
Schrumpf, Marion
Daniel, Rolf
author_sort Kaiser, Kristin
collection PubMed
description Soil bacteria provide a large range of ecosystem services such as nutrient cycling. Despite their important role in soil systems, compositional and functional responses of bacterial communities to different land use and management regimes are not fully understood. Here, we assessed soil bacterial communities in 150 forest and 150 grassland soils derived from three German regions by pyrotag sequencing of 16S rRNA genes. Land use type (forest and grassland) and soil edaphic properties strongly affected bacterial community structure and function, whereas management regime had a minor effect. In addition, a separation of soil bacterial communities by sampling region was encountered. Soil pH was the best predictor for bacterial community structure, diversity and function. The application of multinomial log-linear models revealed distinct responses of abundant bacterial groups towards pH. Predicted functional profiles revealed that differences in land use not only select for distinct bacterial populations but also for specific functional traits. The combination of 16S rRNA data and corresponding functional profiles provided comprehensive insights into compositional and functional adaptations to changing environmental conditions associated with differences in land use and management.
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spelling pubmed-50306462016-09-26 Driving forces of soil bacterial community structure, diversity, and function in temperate grasslands and forests Kaiser, Kristin Wemheuer, Bernd Korolkow, Vera Wemheuer, Franziska Nacke, Heiko Schöning, Ingo Schrumpf, Marion Daniel, Rolf Sci Rep Article Soil bacteria provide a large range of ecosystem services such as nutrient cycling. Despite their important role in soil systems, compositional and functional responses of bacterial communities to different land use and management regimes are not fully understood. Here, we assessed soil bacterial communities in 150 forest and 150 grassland soils derived from three German regions by pyrotag sequencing of 16S rRNA genes. Land use type (forest and grassland) and soil edaphic properties strongly affected bacterial community structure and function, whereas management regime had a minor effect. In addition, a separation of soil bacterial communities by sampling region was encountered. Soil pH was the best predictor for bacterial community structure, diversity and function. The application of multinomial log-linear models revealed distinct responses of abundant bacterial groups towards pH. Predicted functional profiles revealed that differences in land use not only select for distinct bacterial populations but also for specific functional traits. The combination of 16S rRNA data and corresponding functional profiles provided comprehensive insights into compositional and functional adaptations to changing environmental conditions associated with differences in land use and management. Nature Publishing Group 2016-09-21 /pmc/articles/PMC5030646/ /pubmed/27650273 http://dx.doi.org/10.1038/srep33696 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Kaiser, Kristin
Wemheuer, Bernd
Korolkow, Vera
Wemheuer, Franziska
Nacke, Heiko
Schöning, Ingo
Schrumpf, Marion
Daniel, Rolf
Driving forces of soil bacterial community structure, diversity, and function in temperate grasslands and forests
title Driving forces of soil bacterial community structure, diversity, and function in temperate grasslands and forests
title_full Driving forces of soil bacterial community structure, diversity, and function in temperate grasslands and forests
title_fullStr Driving forces of soil bacterial community structure, diversity, and function in temperate grasslands and forests
title_full_unstemmed Driving forces of soil bacterial community structure, diversity, and function in temperate grasslands and forests
title_short Driving forces of soil bacterial community structure, diversity, and function in temperate grasslands and forests
title_sort driving forces of soil bacterial community structure, diversity, and function in temperate grasslands and forests
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5030646/
https://www.ncbi.nlm.nih.gov/pubmed/27650273
http://dx.doi.org/10.1038/srep33696
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