Cargando…
Structure and catalytic mechanism of monodehydroascorbate reductase, MDHAR, from Oryza sativa L. japonica
Ascorbic acid (AsA) maintains redox homeostasis by scavenging reactive oxygen species from prokaryotes to eukaryotes, especially plants. The enzyme monodehydroascorbate reductase (MDHAR) regenerates AsA by catalysing the reduction of monodehydroascorbate, using NADH or NADPH as an electron donor. Th...
Autores principales: | , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2016
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5031999/ https://www.ncbi.nlm.nih.gov/pubmed/27652777 http://dx.doi.org/10.1038/srep33903 |
_version_ | 1782454903676862464 |
---|---|
author | Park, Ae Kyung Kim, Il-Sup Do, Hackwon Jeon, Byung Wook Lee, Chang Woo Roh, Soo Jung Shin, Seung Chul Park, Hyun Kim, Young-Saeng Kim, Yul-Ho Yoon, Ho-Sung Lee, Jun Hyuck Kim, Han-Woo |
author_facet | Park, Ae Kyung Kim, Il-Sup Do, Hackwon Jeon, Byung Wook Lee, Chang Woo Roh, Soo Jung Shin, Seung Chul Park, Hyun Kim, Young-Saeng Kim, Yul-Ho Yoon, Ho-Sung Lee, Jun Hyuck Kim, Han-Woo |
author_sort | Park, Ae Kyung |
collection | PubMed |
description | Ascorbic acid (AsA) maintains redox homeostasis by scavenging reactive oxygen species from prokaryotes to eukaryotes, especially plants. The enzyme monodehydroascorbate reductase (MDHAR) regenerates AsA by catalysing the reduction of monodehydroascorbate, using NADH or NADPH as an electron donor. The detailed recycling mechanism of MDHAR remains unclear due to lack of structural information. Here, we present the crystal structures of MDHAR in the presence of cofactors, nicotinamide adenine dinucleotide (NAD(+)) and nicotinamide adenine dinucleotide phosphate (NADP(+)), and complexed with AsA as well as its analogue, isoascorbic acid (ISD). The overall structure of MDHAR is similar to other iron-sulphur protein reductases, except for a unique long loop of 63–80 residues, which seems to be essential in forming the active site pocket. From the structural analysis and structure-guided point mutations, we found that the Arg320 residue plays a major substrate binding role, and the Tyr349 residue mediates electron transfer from NAD(P)H to bound substrate via FAD. The enzymatic activity of MDHAR favours NADH as an electron donor over NADPH. Our results show, for the first time, structural insights into this preference. The MDHAR-ISD complex structure revealed an alternative binding conformation of ISD, compared with the MDHAR-AsA complex. This implies a broad substrate (antioxidant) specificity and resulting greater protective ability of MDHAR. |
format | Online Article Text |
id | pubmed-5031999 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-50319992016-09-29 Structure and catalytic mechanism of monodehydroascorbate reductase, MDHAR, from Oryza sativa L. japonica Park, Ae Kyung Kim, Il-Sup Do, Hackwon Jeon, Byung Wook Lee, Chang Woo Roh, Soo Jung Shin, Seung Chul Park, Hyun Kim, Young-Saeng Kim, Yul-Ho Yoon, Ho-Sung Lee, Jun Hyuck Kim, Han-Woo Sci Rep Article Ascorbic acid (AsA) maintains redox homeostasis by scavenging reactive oxygen species from prokaryotes to eukaryotes, especially plants. The enzyme monodehydroascorbate reductase (MDHAR) regenerates AsA by catalysing the reduction of monodehydroascorbate, using NADH or NADPH as an electron donor. The detailed recycling mechanism of MDHAR remains unclear due to lack of structural information. Here, we present the crystal structures of MDHAR in the presence of cofactors, nicotinamide adenine dinucleotide (NAD(+)) and nicotinamide adenine dinucleotide phosphate (NADP(+)), and complexed with AsA as well as its analogue, isoascorbic acid (ISD). The overall structure of MDHAR is similar to other iron-sulphur protein reductases, except for a unique long loop of 63–80 residues, which seems to be essential in forming the active site pocket. From the structural analysis and structure-guided point mutations, we found that the Arg320 residue plays a major substrate binding role, and the Tyr349 residue mediates electron transfer from NAD(P)H to bound substrate via FAD. The enzymatic activity of MDHAR favours NADH as an electron donor over NADPH. Our results show, for the first time, structural insights into this preference. The MDHAR-ISD complex structure revealed an alternative binding conformation of ISD, compared with the MDHAR-AsA complex. This implies a broad substrate (antioxidant) specificity and resulting greater protective ability of MDHAR. Nature Publishing Group 2016-09-22 /pmc/articles/PMC5031999/ /pubmed/27652777 http://dx.doi.org/10.1038/srep33903 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Park, Ae Kyung Kim, Il-Sup Do, Hackwon Jeon, Byung Wook Lee, Chang Woo Roh, Soo Jung Shin, Seung Chul Park, Hyun Kim, Young-Saeng Kim, Yul-Ho Yoon, Ho-Sung Lee, Jun Hyuck Kim, Han-Woo Structure and catalytic mechanism of monodehydroascorbate reductase, MDHAR, from Oryza sativa L. japonica |
title | Structure and catalytic mechanism of monodehydroascorbate reductase, MDHAR, from Oryza sativa L. japonica |
title_full | Structure and catalytic mechanism of monodehydroascorbate reductase, MDHAR, from Oryza sativa L. japonica |
title_fullStr | Structure and catalytic mechanism of monodehydroascorbate reductase, MDHAR, from Oryza sativa L. japonica |
title_full_unstemmed | Structure and catalytic mechanism of monodehydroascorbate reductase, MDHAR, from Oryza sativa L. japonica |
title_short | Structure and catalytic mechanism of monodehydroascorbate reductase, MDHAR, from Oryza sativa L. japonica |
title_sort | structure and catalytic mechanism of monodehydroascorbate reductase, mdhar, from oryza sativa l. japonica |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5031999/ https://www.ncbi.nlm.nih.gov/pubmed/27652777 http://dx.doi.org/10.1038/srep33903 |
work_keys_str_mv | AT parkaekyung structureandcatalyticmechanismofmonodehydroascorbatereductasemdharfromoryzasativaljaponica AT kimilsup structureandcatalyticmechanismofmonodehydroascorbatereductasemdharfromoryzasativaljaponica AT dohackwon structureandcatalyticmechanismofmonodehydroascorbatereductasemdharfromoryzasativaljaponica AT jeonbyungwook structureandcatalyticmechanismofmonodehydroascorbatereductasemdharfromoryzasativaljaponica AT leechangwoo structureandcatalyticmechanismofmonodehydroascorbatereductasemdharfromoryzasativaljaponica AT rohsoojung structureandcatalyticmechanismofmonodehydroascorbatereductasemdharfromoryzasativaljaponica AT shinseungchul structureandcatalyticmechanismofmonodehydroascorbatereductasemdharfromoryzasativaljaponica AT parkhyun structureandcatalyticmechanismofmonodehydroascorbatereductasemdharfromoryzasativaljaponica AT kimyoungsaeng structureandcatalyticmechanismofmonodehydroascorbatereductasemdharfromoryzasativaljaponica AT kimyulho structureandcatalyticmechanismofmonodehydroascorbatereductasemdharfromoryzasativaljaponica AT yoonhosung structureandcatalyticmechanismofmonodehydroascorbatereductasemdharfromoryzasativaljaponica AT leejunhyuck structureandcatalyticmechanismofmonodehydroascorbatereductasemdharfromoryzasativaljaponica AT kimhanwoo structureandcatalyticmechanismofmonodehydroascorbatereductasemdharfromoryzasativaljaponica |