Cargando…

Differential Lipid Profiles of Normal Human Brain Matter and Gliomas by Positive and Negative Mode Desorption Electrospray Ionization – Mass Spectrometry Imaging

Desorption electrospray ionization—mass spectrometry (DESI-MS) imaging was used to analyze unmodified human brain tissue sections from 39 subjects sequentially in the positive and negative ionization modes. Acquisition of both MS polarities allowed more complete analysis of the human brain tumor lip...

Descripción completa

Detalles Bibliográficos
Autores principales: Jarmusch, Alan K., Alfaro, Clint M., Pirro, Valentina, Hattab, Eyas M., Cohen-Gadol, Aaron A., Cooks, R. Graham
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5033406/
https://www.ncbi.nlm.nih.gov/pubmed/27658243
http://dx.doi.org/10.1371/journal.pone.0163180
_version_ 1782455138228633600
author Jarmusch, Alan K.
Alfaro, Clint M.
Pirro, Valentina
Hattab, Eyas M.
Cohen-Gadol, Aaron A.
Cooks, R. Graham
author_facet Jarmusch, Alan K.
Alfaro, Clint M.
Pirro, Valentina
Hattab, Eyas M.
Cohen-Gadol, Aaron A.
Cooks, R. Graham
author_sort Jarmusch, Alan K.
collection PubMed
description Desorption electrospray ionization—mass spectrometry (DESI-MS) imaging was used to analyze unmodified human brain tissue sections from 39 subjects sequentially in the positive and negative ionization modes. Acquisition of both MS polarities allowed more complete analysis of the human brain tumor lipidome as some phospholipids ionize preferentially in the positive and others in the negative ion mode. Normal brain parenchyma, comprised of grey matter and white matter, was differentiated from glioma using positive and negative ion mode DESI-MS lipid profiles with the aid of principal component analysis along with linear discriminant analysis. Principal component–linear discriminant analyses of the positive mode lipid profiles was able to distinguish grey matter, white matter, and glioma with an average sensitivity of 93.2% and specificity of 96.6%, while the negative mode lipid profiles had an average sensitivity of 94.1% and specificity of 97.4%. The positive and negative mode lipid profiles provided complementary information. Principal component–linear discriminant analysis of the combined positive and negative mode lipid profiles, via data fusion, resulted in approximately the same average sensitivity (94.7%) and specificity (97.6%) of the positive and negative modes when used individually. However, they complemented each other by improving the sensitivity and specificity of all classes (grey matter, white matter, and glioma) beyond 90% when used in combination. Further principal component analysis using the fused data resulted in the subgrouping of glioma into two groups associated with grey and white matter, respectively, a separation not apparent in the principal component analysis scores plots of the separate positive and negative mode data. The interrelationship of tumor cell percentage and the lipid profiles is discussed, and how such a measure could be used to measure residual tumor at surgical margins.
format Online
Article
Text
id pubmed-5033406
institution National Center for Biotechnology Information
language English
publishDate 2016
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-50334062016-10-10 Differential Lipid Profiles of Normal Human Brain Matter and Gliomas by Positive and Negative Mode Desorption Electrospray Ionization – Mass Spectrometry Imaging Jarmusch, Alan K. Alfaro, Clint M. Pirro, Valentina Hattab, Eyas M. Cohen-Gadol, Aaron A. Cooks, R. Graham PLoS One Research Article Desorption electrospray ionization—mass spectrometry (DESI-MS) imaging was used to analyze unmodified human brain tissue sections from 39 subjects sequentially in the positive and negative ionization modes. Acquisition of both MS polarities allowed more complete analysis of the human brain tumor lipidome as some phospholipids ionize preferentially in the positive and others in the negative ion mode. Normal brain parenchyma, comprised of grey matter and white matter, was differentiated from glioma using positive and negative ion mode DESI-MS lipid profiles with the aid of principal component analysis along with linear discriminant analysis. Principal component–linear discriminant analyses of the positive mode lipid profiles was able to distinguish grey matter, white matter, and glioma with an average sensitivity of 93.2% and specificity of 96.6%, while the negative mode lipid profiles had an average sensitivity of 94.1% and specificity of 97.4%. The positive and negative mode lipid profiles provided complementary information. Principal component–linear discriminant analysis of the combined positive and negative mode lipid profiles, via data fusion, resulted in approximately the same average sensitivity (94.7%) and specificity (97.6%) of the positive and negative modes when used individually. However, they complemented each other by improving the sensitivity and specificity of all classes (grey matter, white matter, and glioma) beyond 90% when used in combination. Further principal component analysis using the fused data resulted in the subgrouping of glioma into two groups associated with grey and white matter, respectively, a separation not apparent in the principal component analysis scores plots of the separate positive and negative mode data. The interrelationship of tumor cell percentage and the lipid profiles is discussed, and how such a measure could be used to measure residual tumor at surgical margins. Public Library of Science 2016-09-22 /pmc/articles/PMC5033406/ /pubmed/27658243 http://dx.doi.org/10.1371/journal.pone.0163180 Text en © 2016 Jarmusch et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Jarmusch, Alan K.
Alfaro, Clint M.
Pirro, Valentina
Hattab, Eyas M.
Cohen-Gadol, Aaron A.
Cooks, R. Graham
Differential Lipid Profiles of Normal Human Brain Matter and Gliomas by Positive and Negative Mode Desorption Electrospray Ionization – Mass Spectrometry Imaging
title Differential Lipid Profiles of Normal Human Brain Matter and Gliomas by Positive and Negative Mode Desorption Electrospray Ionization – Mass Spectrometry Imaging
title_full Differential Lipid Profiles of Normal Human Brain Matter and Gliomas by Positive and Negative Mode Desorption Electrospray Ionization – Mass Spectrometry Imaging
title_fullStr Differential Lipid Profiles of Normal Human Brain Matter and Gliomas by Positive and Negative Mode Desorption Electrospray Ionization – Mass Spectrometry Imaging
title_full_unstemmed Differential Lipid Profiles of Normal Human Brain Matter and Gliomas by Positive and Negative Mode Desorption Electrospray Ionization – Mass Spectrometry Imaging
title_short Differential Lipid Profiles of Normal Human Brain Matter and Gliomas by Positive and Negative Mode Desorption Electrospray Ionization – Mass Spectrometry Imaging
title_sort differential lipid profiles of normal human brain matter and gliomas by positive and negative mode desorption electrospray ionization – mass spectrometry imaging
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5033406/
https://www.ncbi.nlm.nih.gov/pubmed/27658243
http://dx.doi.org/10.1371/journal.pone.0163180
work_keys_str_mv AT jarmuschalank differentiallipidprofilesofnormalhumanbrainmatterandgliomasbypositiveandnegativemodedesorptionelectrosprayionizationmassspectrometryimaging
AT alfaroclintm differentiallipidprofilesofnormalhumanbrainmatterandgliomasbypositiveandnegativemodedesorptionelectrosprayionizationmassspectrometryimaging
AT pirrovalentina differentiallipidprofilesofnormalhumanbrainmatterandgliomasbypositiveandnegativemodedesorptionelectrosprayionizationmassspectrometryimaging
AT hattabeyasm differentiallipidprofilesofnormalhumanbrainmatterandgliomasbypositiveandnegativemodedesorptionelectrosprayionizationmassspectrometryimaging
AT cohengadolaarona differentiallipidprofilesofnormalhumanbrainmatterandgliomasbypositiveandnegativemodedesorptionelectrosprayionizationmassspectrometryimaging
AT cooksrgraham differentiallipidprofilesofnormalhumanbrainmatterandgliomasbypositiveandnegativemodedesorptionelectrosprayionizationmassspectrometryimaging