Cargando…
The Salinity Responsive Mechanism of a Hydroxyproline-Tolerant Mutant of Peanut Based on Digital Gene Expression Profiling Analysis
Soil salinity seriously limits plant growth and yield. Strategies have been developed for plants to cope with various environmental stresses during evolution. To screen for the broad-spectrum genes and the molecular mechanism about a hydroxyproline-tolerant mutant of peanut with enhanced salinity re...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2016
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5035014/ https://www.ncbi.nlm.nih.gov/pubmed/27661086 http://dx.doi.org/10.1371/journal.pone.0162556 |
_version_ | 1782455364385505280 |
---|---|
author | Sui, Jiongming Jiang, Defeng Zhang, Dandan Song, Xiaojun Wang, Jingshan Zhao, Mingxia Qiao, Lixian |
author_facet | Sui, Jiongming Jiang, Defeng Zhang, Dandan Song, Xiaojun Wang, Jingshan Zhao, Mingxia Qiao, Lixian |
author_sort | Sui, Jiongming |
collection | PubMed |
description | Soil salinity seriously limits plant growth and yield. Strategies have been developed for plants to cope with various environmental stresses during evolution. To screen for the broad-spectrum genes and the molecular mechanism about a hydroxyproline-tolerant mutant of peanut with enhanced salinity resistance under salinity stress, digital gene expression (DGE) sequencing was performed in the leaves of salinity-resistant mutant (S2) and Huayu20 as control (S4) under salt stress. The results indicate that major transcription factor families linked to salinity stress responses (NAC, bHLH, WRKY, AP2/ERF) are differentially expressed in the leaves of peanut under salinity stress. In addition, genes related to cell wall loosening and stiffening (xyloglucan endotransglucosylase/hydrolases, peroxidases, lipid transfer protein, expansin, extension), late embryogenesis abundant protein family, fatty acid biosynthesis and metabolism (13-lipoxygenase omega-6 fatty acid desaturase, omega-3 fatty acid desaturase) and some previously reported stress-related genes encoding proteins such as defensin, universal stress protein, metallothionein, peroxidase etc, and some other known or unknown function stress related genes, have been identified. The information from this study will be useful for further research on the mechanism of salinity resistance and will provide a useful genomic resource for the breeding of salinity resistance variety in peanut. |
format | Online Article Text |
id | pubmed-5035014 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-50350142016-11-18 The Salinity Responsive Mechanism of a Hydroxyproline-Tolerant Mutant of Peanut Based on Digital Gene Expression Profiling Analysis Sui, Jiongming Jiang, Defeng Zhang, Dandan Song, Xiaojun Wang, Jingshan Zhao, Mingxia Qiao, Lixian PLoS One Research Article Soil salinity seriously limits plant growth and yield. Strategies have been developed for plants to cope with various environmental stresses during evolution. To screen for the broad-spectrum genes and the molecular mechanism about a hydroxyproline-tolerant mutant of peanut with enhanced salinity resistance under salinity stress, digital gene expression (DGE) sequencing was performed in the leaves of salinity-resistant mutant (S2) and Huayu20 as control (S4) under salt stress. The results indicate that major transcription factor families linked to salinity stress responses (NAC, bHLH, WRKY, AP2/ERF) are differentially expressed in the leaves of peanut under salinity stress. In addition, genes related to cell wall loosening and stiffening (xyloglucan endotransglucosylase/hydrolases, peroxidases, lipid transfer protein, expansin, extension), late embryogenesis abundant protein family, fatty acid biosynthesis and metabolism (13-lipoxygenase omega-6 fatty acid desaturase, omega-3 fatty acid desaturase) and some previously reported stress-related genes encoding proteins such as defensin, universal stress protein, metallothionein, peroxidase etc, and some other known or unknown function stress related genes, have been identified. The information from this study will be useful for further research on the mechanism of salinity resistance and will provide a useful genomic resource for the breeding of salinity resistance variety in peanut. Public Library of Science 2016-09-23 /pmc/articles/PMC5035014/ /pubmed/27661086 http://dx.doi.org/10.1371/journal.pone.0162556 Text en © 2016 Sui et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Sui, Jiongming Jiang, Defeng Zhang, Dandan Song, Xiaojun Wang, Jingshan Zhao, Mingxia Qiao, Lixian The Salinity Responsive Mechanism of a Hydroxyproline-Tolerant Mutant of Peanut Based on Digital Gene Expression Profiling Analysis |
title | The Salinity Responsive Mechanism of a Hydroxyproline-Tolerant Mutant of Peanut Based on Digital Gene Expression Profiling Analysis |
title_full | The Salinity Responsive Mechanism of a Hydroxyproline-Tolerant Mutant of Peanut Based on Digital Gene Expression Profiling Analysis |
title_fullStr | The Salinity Responsive Mechanism of a Hydroxyproline-Tolerant Mutant of Peanut Based on Digital Gene Expression Profiling Analysis |
title_full_unstemmed | The Salinity Responsive Mechanism of a Hydroxyproline-Tolerant Mutant of Peanut Based on Digital Gene Expression Profiling Analysis |
title_short | The Salinity Responsive Mechanism of a Hydroxyproline-Tolerant Mutant of Peanut Based on Digital Gene Expression Profiling Analysis |
title_sort | salinity responsive mechanism of a hydroxyproline-tolerant mutant of peanut based on digital gene expression profiling analysis |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5035014/ https://www.ncbi.nlm.nih.gov/pubmed/27661086 http://dx.doi.org/10.1371/journal.pone.0162556 |
work_keys_str_mv | AT suijiongming thesalinityresponsivemechanismofahydroxyprolinetolerantmutantofpeanutbasedondigitalgeneexpressionprofilinganalysis AT jiangdefeng thesalinityresponsivemechanismofahydroxyprolinetolerantmutantofpeanutbasedondigitalgeneexpressionprofilinganalysis AT zhangdandan thesalinityresponsivemechanismofahydroxyprolinetolerantmutantofpeanutbasedondigitalgeneexpressionprofilinganalysis AT songxiaojun thesalinityresponsivemechanismofahydroxyprolinetolerantmutantofpeanutbasedondigitalgeneexpressionprofilinganalysis AT wangjingshan thesalinityresponsivemechanismofahydroxyprolinetolerantmutantofpeanutbasedondigitalgeneexpressionprofilinganalysis AT zhaomingxia thesalinityresponsivemechanismofahydroxyprolinetolerantmutantofpeanutbasedondigitalgeneexpressionprofilinganalysis AT qiaolixian thesalinityresponsivemechanismofahydroxyprolinetolerantmutantofpeanutbasedondigitalgeneexpressionprofilinganalysis AT suijiongming salinityresponsivemechanismofahydroxyprolinetolerantmutantofpeanutbasedondigitalgeneexpressionprofilinganalysis AT jiangdefeng salinityresponsivemechanismofahydroxyprolinetolerantmutantofpeanutbasedondigitalgeneexpressionprofilinganalysis AT zhangdandan salinityresponsivemechanismofahydroxyprolinetolerantmutantofpeanutbasedondigitalgeneexpressionprofilinganalysis AT songxiaojun salinityresponsivemechanismofahydroxyprolinetolerantmutantofpeanutbasedondigitalgeneexpressionprofilinganalysis AT wangjingshan salinityresponsivemechanismofahydroxyprolinetolerantmutantofpeanutbasedondigitalgeneexpressionprofilinganalysis AT zhaomingxia salinityresponsivemechanismofahydroxyprolinetolerantmutantofpeanutbasedondigitalgeneexpressionprofilinganalysis AT qiaolixian salinityresponsivemechanismofahydroxyprolinetolerantmutantofpeanutbasedondigitalgeneexpressionprofilinganalysis |