Cargando…

Native phasing of x-ray free-electron laser data for a G protein–coupled receptor

Serial femtosecond crystallography (SFX) takes advantage of extremely bright and ultrashort pulses produced by x-ray free-electron lasers (XFELs), allowing for the collection of high-resolution diffraction intensities from micrometer-sized crystals at room temperature with minimal radiation damage,...

Descripción completa

Detalles Bibliográficos
Autores principales: Batyuk, Alexander, Galli, Lorenzo, Ishchenko, Andrii, Han, Gye Won, Gati, Cornelius, Popov, Petr A., Lee, Ming-Yue, Stauch, Benjamin, White, Thomas A., Barty, Anton, Aquila, Andrew, Hunter, Mark S., Liang, Mengning, Boutet, Sébastien, Pu, Mengchen, Liu, Zhi-jie, Nelson, Garrett, James, Daniel, Li, Chufeng, Zhao, Yun, Spence, John C. H., Liu, Wei, Fromme, Petra, Katritch, Vsevolod, Weierstall, Uwe, Stevens, Raymond C., Cherezov, Vadim
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Association for the Advancement of Science 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5035125/
https://www.ncbi.nlm.nih.gov/pubmed/27679816
http://dx.doi.org/10.1126/sciadv.1600292
_version_ 1782455382064496640
author Batyuk, Alexander
Galli, Lorenzo
Ishchenko, Andrii
Han, Gye Won
Gati, Cornelius
Popov, Petr A.
Lee, Ming-Yue
Stauch, Benjamin
White, Thomas A.
Barty, Anton
Aquila, Andrew
Hunter, Mark S.
Liang, Mengning
Boutet, Sébastien
Pu, Mengchen
Liu, Zhi-jie
Nelson, Garrett
James, Daniel
Li, Chufeng
Zhao, Yun
Spence, John C. H.
Liu, Wei
Fromme, Petra
Katritch, Vsevolod
Weierstall, Uwe
Stevens, Raymond C.
Cherezov, Vadim
author_facet Batyuk, Alexander
Galli, Lorenzo
Ishchenko, Andrii
Han, Gye Won
Gati, Cornelius
Popov, Petr A.
Lee, Ming-Yue
Stauch, Benjamin
White, Thomas A.
Barty, Anton
Aquila, Andrew
Hunter, Mark S.
Liang, Mengning
Boutet, Sébastien
Pu, Mengchen
Liu, Zhi-jie
Nelson, Garrett
James, Daniel
Li, Chufeng
Zhao, Yun
Spence, John C. H.
Liu, Wei
Fromme, Petra
Katritch, Vsevolod
Weierstall, Uwe
Stevens, Raymond C.
Cherezov, Vadim
author_sort Batyuk, Alexander
collection PubMed
description Serial femtosecond crystallography (SFX) takes advantage of extremely bright and ultrashort pulses produced by x-ray free-electron lasers (XFELs), allowing for the collection of high-resolution diffraction intensities from micrometer-sized crystals at room temperature with minimal radiation damage, using the principle of “diffraction-before-destruction.” However, de novo structure factor phase determination using XFELs has been difficult so far. We demonstrate the ability to solve the crystallographic phase problem for SFX data collected with an XFEL using the anomalous signal from native sulfur atoms, leading to a bias-free room temperature structure of the human A(2A) adenosine receptor at 1.9 Å resolution. The advancement was made possible by recent improvements in SFX data analysis and the design of injectors and delivery media for streaming hydrated microcrystals. This general method should accelerate structural studies of novel difficult-to-crystallize macromolecules and their complexes.
format Online
Article
Text
id pubmed-5035125
institution National Center for Biotechnology Information
language English
publishDate 2016
publisher American Association for the Advancement of Science
record_format MEDLINE/PubMed
spelling pubmed-50351252016-09-27 Native phasing of x-ray free-electron laser data for a G protein–coupled receptor Batyuk, Alexander Galli, Lorenzo Ishchenko, Andrii Han, Gye Won Gati, Cornelius Popov, Petr A. Lee, Ming-Yue Stauch, Benjamin White, Thomas A. Barty, Anton Aquila, Andrew Hunter, Mark S. Liang, Mengning Boutet, Sébastien Pu, Mengchen Liu, Zhi-jie Nelson, Garrett James, Daniel Li, Chufeng Zhao, Yun Spence, John C. H. Liu, Wei Fromme, Petra Katritch, Vsevolod Weierstall, Uwe Stevens, Raymond C. Cherezov, Vadim Sci Adv Research Articles Serial femtosecond crystallography (SFX) takes advantage of extremely bright and ultrashort pulses produced by x-ray free-electron lasers (XFELs), allowing for the collection of high-resolution diffraction intensities from micrometer-sized crystals at room temperature with minimal radiation damage, using the principle of “diffraction-before-destruction.” However, de novo structure factor phase determination using XFELs has been difficult so far. We demonstrate the ability to solve the crystallographic phase problem for SFX data collected with an XFEL using the anomalous signal from native sulfur atoms, leading to a bias-free room temperature structure of the human A(2A) adenosine receptor at 1.9 Å resolution. The advancement was made possible by recent improvements in SFX data analysis and the design of injectors and delivery media for streaming hydrated microcrystals. This general method should accelerate structural studies of novel difficult-to-crystallize macromolecules and their complexes. American Association for the Advancement of Science 2016-09-23 /pmc/articles/PMC5035125/ /pubmed/27679816 http://dx.doi.org/10.1126/sciadv.1600292 Text en Copyright © 2016, The Authors http://creativecommons.org/licenses/by-nc/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution-NonCommercial license (http://creativecommons.org/licenses/by-nc/4.0/) , which permits use, distribution, and reproduction in any medium, so long as the resultant use is not for commercial advantage and provided the original work is properly cited.
spellingShingle Research Articles
Batyuk, Alexander
Galli, Lorenzo
Ishchenko, Andrii
Han, Gye Won
Gati, Cornelius
Popov, Petr A.
Lee, Ming-Yue
Stauch, Benjamin
White, Thomas A.
Barty, Anton
Aquila, Andrew
Hunter, Mark S.
Liang, Mengning
Boutet, Sébastien
Pu, Mengchen
Liu, Zhi-jie
Nelson, Garrett
James, Daniel
Li, Chufeng
Zhao, Yun
Spence, John C. H.
Liu, Wei
Fromme, Petra
Katritch, Vsevolod
Weierstall, Uwe
Stevens, Raymond C.
Cherezov, Vadim
Native phasing of x-ray free-electron laser data for a G protein–coupled receptor
title Native phasing of x-ray free-electron laser data for a G protein–coupled receptor
title_full Native phasing of x-ray free-electron laser data for a G protein–coupled receptor
title_fullStr Native phasing of x-ray free-electron laser data for a G protein–coupled receptor
title_full_unstemmed Native phasing of x-ray free-electron laser data for a G protein–coupled receptor
title_short Native phasing of x-ray free-electron laser data for a G protein–coupled receptor
title_sort native phasing of x-ray free-electron laser data for a g protein–coupled receptor
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5035125/
https://www.ncbi.nlm.nih.gov/pubmed/27679816
http://dx.doi.org/10.1126/sciadv.1600292
work_keys_str_mv AT batyukalexander nativephasingofxrayfreeelectronlaserdataforagproteincoupledreceptor
AT gallilorenzo nativephasingofxrayfreeelectronlaserdataforagproteincoupledreceptor
AT ishchenkoandrii nativephasingofxrayfreeelectronlaserdataforagproteincoupledreceptor
AT hangyewon nativephasingofxrayfreeelectronlaserdataforagproteincoupledreceptor
AT gaticornelius nativephasingofxrayfreeelectronlaserdataforagproteincoupledreceptor
AT popovpetra nativephasingofxrayfreeelectronlaserdataforagproteincoupledreceptor
AT leemingyue nativephasingofxrayfreeelectronlaserdataforagproteincoupledreceptor
AT stauchbenjamin nativephasingofxrayfreeelectronlaserdataforagproteincoupledreceptor
AT whitethomasa nativephasingofxrayfreeelectronlaserdataforagproteincoupledreceptor
AT bartyanton nativephasingofxrayfreeelectronlaserdataforagproteincoupledreceptor
AT aquilaandrew nativephasingofxrayfreeelectronlaserdataforagproteincoupledreceptor
AT huntermarks nativephasingofxrayfreeelectronlaserdataforagproteincoupledreceptor
AT liangmengning nativephasingofxrayfreeelectronlaserdataforagproteincoupledreceptor
AT boutetsebastien nativephasingofxrayfreeelectronlaserdataforagproteincoupledreceptor
AT pumengchen nativephasingofxrayfreeelectronlaserdataforagproteincoupledreceptor
AT liuzhijie nativephasingofxrayfreeelectronlaserdataforagproteincoupledreceptor
AT nelsongarrett nativephasingofxrayfreeelectronlaserdataforagproteincoupledreceptor
AT jamesdaniel nativephasingofxrayfreeelectronlaserdataforagproteincoupledreceptor
AT lichufeng nativephasingofxrayfreeelectronlaserdataforagproteincoupledreceptor
AT zhaoyun nativephasingofxrayfreeelectronlaserdataforagproteincoupledreceptor
AT spencejohnch nativephasingofxrayfreeelectronlaserdataforagproteincoupledreceptor
AT liuwei nativephasingofxrayfreeelectronlaserdataforagproteincoupledreceptor
AT frommepetra nativephasingofxrayfreeelectronlaserdataforagproteincoupledreceptor
AT katritchvsevolod nativephasingofxrayfreeelectronlaserdataforagproteincoupledreceptor
AT weierstalluwe nativephasingofxrayfreeelectronlaserdataforagproteincoupledreceptor
AT stevensraymondc nativephasingofxrayfreeelectronlaserdataforagproteincoupledreceptor
AT cherezovvadim nativephasingofxrayfreeelectronlaserdataforagproteincoupledreceptor