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Draft genome sequence of Microbacterium oleivorans strain Wellendorf implicates heterotrophic versatility and bioremediation potential

Microbacterium oleivorans is a predominant member of hydrocarbon-contaminated environments. We here report on the genomic analysis of M. oleivorans strain Wellendorf that was isolated from an indoor door handle. The partial genome of M. oleivorans strain Wellendorf consists of 2,916,870 bp of DNA wi...

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Autores principales: Avramov, Anton P., Couger, M.B., Hartley, Emily L., Land, Craig, Wellendorf, Rachel, Hanafy, Radwa A., Budd, Connie, French, Donald P., Hoff, Wouter D., Youssef, Noha
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5035333/
https://www.ncbi.nlm.nih.gov/pubmed/27699150
http://dx.doi.org/10.1016/j.gdata.2016.09.005
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author Avramov, Anton P.
Couger, M.B.
Hartley, Emily L.
Land, Craig
Wellendorf, Rachel
Hanafy, Radwa A.
Budd, Connie
French, Donald P.
Hoff, Wouter D.
Youssef, Noha
author_facet Avramov, Anton P.
Couger, M.B.
Hartley, Emily L.
Land, Craig
Wellendorf, Rachel
Hanafy, Radwa A.
Budd, Connie
French, Donald P.
Hoff, Wouter D.
Youssef, Noha
author_sort Avramov, Anton P.
collection PubMed
description Microbacterium oleivorans is a predominant member of hydrocarbon-contaminated environments. We here report on the genomic analysis of M. oleivorans strain Wellendorf that was isolated from an indoor door handle. The partial genome of M. oleivorans strain Wellendorf consists of 2,916,870 bp of DNA with 2831 protein-coding genes and 49 RNA genes. The organism appears to be a versatile mesophilic heterotroph potentially capable of hydrolysis a suite of carbohydrates and amino acids. Genomic analysis revealed metabolic versatility with genes involved in the metabolism and transport of glucose, fructose, rhamnose, galactose, xylose, arabinose, alanine, aspartate, asparagine, glutamate, serine, glycine, threonine and cysteine. This is the first detailed analysis of a Microbacterium oleivorans genome.
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spelling pubmed-50353332016-10-03 Draft genome sequence of Microbacterium oleivorans strain Wellendorf implicates heterotrophic versatility and bioremediation potential Avramov, Anton P. Couger, M.B. Hartley, Emily L. Land, Craig Wellendorf, Rachel Hanafy, Radwa A. Budd, Connie French, Donald P. Hoff, Wouter D. Youssef, Noha Genom Data Regular Article Microbacterium oleivorans is a predominant member of hydrocarbon-contaminated environments. We here report on the genomic analysis of M. oleivorans strain Wellendorf that was isolated from an indoor door handle. The partial genome of M. oleivorans strain Wellendorf consists of 2,916,870 bp of DNA with 2831 protein-coding genes and 49 RNA genes. The organism appears to be a versatile mesophilic heterotroph potentially capable of hydrolysis a suite of carbohydrates and amino acids. Genomic analysis revealed metabolic versatility with genes involved in the metabolism and transport of glucose, fructose, rhamnose, galactose, xylose, arabinose, alanine, aspartate, asparagine, glutamate, serine, glycine, threonine and cysteine. This is the first detailed analysis of a Microbacterium oleivorans genome. Elsevier 2016-09-17 /pmc/articles/PMC5035333/ /pubmed/27699150 http://dx.doi.org/10.1016/j.gdata.2016.09.005 Text en © 2016 Stellenbosch University http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Regular Article
Avramov, Anton P.
Couger, M.B.
Hartley, Emily L.
Land, Craig
Wellendorf, Rachel
Hanafy, Radwa A.
Budd, Connie
French, Donald P.
Hoff, Wouter D.
Youssef, Noha
Draft genome sequence of Microbacterium oleivorans strain Wellendorf implicates heterotrophic versatility and bioremediation potential
title Draft genome sequence of Microbacterium oleivorans strain Wellendorf implicates heterotrophic versatility and bioremediation potential
title_full Draft genome sequence of Microbacterium oleivorans strain Wellendorf implicates heterotrophic versatility and bioremediation potential
title_fullStr Draft genome sequence of Microbacterium oleivorans strain Wellendorf implicates heterotrophic versatility and bioremediation potential
title_full_unstemmed Draft genome sequence of Microbacterium oleivorans strain Wellendorf implicates heterotrophic versatility and bioremediation potential
title_short Draft genome sequence of Microbacterium oleivorans strain Wellendorf implicates heterotrophic versatility and bioremediation potential
title_sort draft genome sequence of microbacterium oleivorans strain wellendorf implicates heterotrophic versatility and bioremediation potential
topic Regular Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5035333/
https://www.ncbi.nlm.nih.gov/pubmed/27699150
http://dx.doi.org/10.1016/j.gdata.2016.09.005
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