Cargando…
Analyzing observed or hidden heterogeneity on survival and mortality in an isogenic C. elegans cohort
It is generally difficult to understand the rates of human mortality from biological and biophysical standpoints because there are no cohorts or genetic homogeneity; in addition, information is limited regarding the various causes of death, such as the types of accidents and diseases. Despite such c...
Autores principales: | , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Biophysical Society of Japan (BSJ)
2009
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5036638/ https://www.ncbi.nlm.nih.gov/pubmed/27857580 http://dx.doi.org/10.2142/biophysics.5.59 |
_version_ | 1782455589040816128 |
---|---|
author | Suda, Hitoshi Shoyama, Tetsuji Shimizu, Yuka |
author_facet | Suda, Hitoshi Shoyama, Tetsuji Shimizu, Yuka |
author_sort | Suda, Hitoshi |
collection | PubMed |
description | It is generally difficult to understand the rates of human mortality from biological and biophysical standpoints because there are no cohorts or genetic homogeneity; in addition, information is limited regarding the various causes of death, such as the types of accidents and diseases. Despite such complexity, Gompertz’s rule is useful in humans. Thus, to characterize the rates of mortality from a demographic viewpoint, it would be interesting to research a single disease in one of the simplest organisms, the nematode C. elegans, which dies naturally under identically controlled circumstances without predators. Here, we report an example of the fact that heterogeneity on survival and mortality is observed through a single disease in a cohort of 100% genetically identical (isogenic) nematodes. Under the observed heterogeneity, we show that the diffusion theory, as a biophysical model, can precisely analyze the heterogeneity and conveniently estimate the degree of penetrance of a lifespan gene from the biodemographic data. In addition, we indicate that heterogeneity models are effective for the present heterogeneous data. |
format | Online Article Text |
id | pubmed-5036638 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2009 |
publisher | The Biophysical Society of Japan (BSJ) |
record_format | MEDLINE/PubMed |
spelling | pubmed-50366382016-11-17 Analyzing observed or hidden heterogeneity on survival and mortality in an isogenic C. elegans cohort Suda, Hitoshi Shoyama, Tetsuji Shimizu, Yuka Biophysics (Nagoya-shi) Articles It is generally difficult to understand the rates of human mortality from biological and biophysical standpoints because there are no cohorts or genetic homogeneity; in addition, information is limited regarding the various causes of death, such as the types of accidents and diseases. Despite such complexity, Gompertz’s rule is useful in humans. Thus, to characterize the rates of mortality from a demographic viewpoint, it would be interesting to research a single disease in one of the simplest organisms, the nematode C. elegans, which dies naturally under identically controlled circumstances without predators. Here, we report an example of the fact that heterogeneity on survival and mortality is observed through a single disease in a cohort of 100% genetically identical (isogenic) nematodes. Under the observed heterogeneity, we show that the diffusion theory, as a biophysical model, can precisely analyze the heterogeneity and conveniently estimate the degree of penetrance of a lifespan gene from the biodemographic data. In addition, we indicate that heterogeneity models are effective for the present heterogeneous data. The Biophysical Society of Japan (BSJ) 2009-10-27 /pmc/articles/PMC5036638/ /pubmed/27857580 http://dx.doi.org/10.2142/biophysics.5.59 Text en 2009 © The Biophysical Society of Japan This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Articles Suda, Hitoshi Shoyama, Tetsuji Shimizu, Yuka Analyzing observed or hidden heterogeneity on survival and mortality in an isogenic C. elegans cohort |
title | Analyzing observed or hidden heterogeneity on survival and mortality in an isogenic C. elegans cohort |
title_full | Analyzing observed or hidden heterogeneity on survival and mortality in an isogenic C. elegans cohort |
title_fullStr | Analyzing observed or hidden heterogeneity on survival and mortality in an isogenic C. elegans cohort |
title_full_unstemmed | Analyzing observed or hidden heterogeneity on survival and mortality in an isogenic C. elegans cohort |
title_short | Analyzing observed or hidden heterogeneity on survival and mortality in an isogenic C. elegans cohort |
title_sort | analyzing observed or hidden heterogeneity on survival and mortality in an isogenic c. elegans cohort |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5036638/ https://www.ncbi.nlm.nih.gov/pubmed/27857580 http://dx.doi.org/10.2142/biophysics.5.59 |
work_keys_str_mv | AT sudahitoshi analyzingobservedorhiddenheterogeneityonsurvivalandmortalityinanisogenicceleganscohort AT shoyamatetsuji analyzingobservedorhiddenheterogeneityonsurvivalandmortalityinanisogenicceleganscohort AT shimizuyuka analyzingobservedorhiddenheterogeneityonsurvivalandmortalityinanisogenicceleganscohort |