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Analyzing observed or hidden heterogeneity on survival and mortality in an isogenic C. elegans cohort

It is generally difficult to understand the rates of human mortality from biological and biophysical standpoints because there are no cohorts or genetic homogeneity; in addition, information is limited regarding the various causes of death, such as the types of accidents and diseases. Despite such c...

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Autores principales: Suda, Hitoshi, Shoyama, Tetsuji, Shimizu, Yuka
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Biophysical Society of Japan (BSJ) 2009
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5036638/
https://www.ncbi.nlm.nih.gov/pubmed/27857580
http://dx.doi.org/10.2142/biophysics.5.59
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author Suda, Hitoshi
Shoyama, Tetsuji
Shimizu, Yuka
author_facet Suda, Hitoshi
Shoyama, Tetsuji
Shimizu, Yuka
author_sort Suda, Hitoshi
collection PubMed
description It is generally difficult to understand the rates of human mortality from biological and biophysical standpoints because there are no cohorts or genetic homogeneity; in addition, information is limited regarding the various causes of death, such as the types of accidents and diseases. Despite such complexity, Gompertz’s rule is useful in humans. Thus, to characterize the rates of mortality from a demographic viewpoint, it would be interesting to research a single disease in one of the simplest organisms, the nematode C. elegans, which dies naturally under identically controlled circumstances without predators. Here, we report an example of the fact that heterogeneity on survival and mortality is observed through a single disease in a cohort of 100% genetically identical (isogenic) nematodes. Under the observed heterogeneity, we show that the diffusion theory, as a biophysical model, can precisely analyze the heterogeneity and conveniently estimate the degree of penetrance of a lifespan gene from the biodemographic data. In addition, we indicate that heterogeneity models are effective for the present heterogeneous data.
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spelling pubmed-50366382016-11-17 Analyzing observed or hidden heterogeneity on survival and mortality in an isogenic C. elegans cohort Suda, Hitoshi Shoyama, Tetsuji Shimizu, Yuka Biophysics (Nagoya-shi) Articles It is generally difficult to understand the rates of human mortality from biological and biophysical standpoints because there are no cohorts or genetic homogeneity; in addition, information is limited regarding the various causes of death, such as the types of accidents and diseases. Despite such complexity, Gompertz’s rule is useful in humans. Thus, to characterize the rates of mortality from a demographic viewpoint, it would be interesting to research a single disease in one of the simplest organisms, the nematode C. elegans, which dies naturally under identically controlled circumstances without predators. Here, we report an example of the fact that heterogeneity on survival and mortality is observed through a single disease in a cohort of 100% genetically identical (isogenic) nematodes. Under the observed heterogeneity, we show that the diffusion theory, as a biophysical model, can precisely analyze the heterogeneity and conveniently estimate the degree of penetrance of a lifespan gene from the biodemographic data. In addition, we indicate that heterogeneity models are effective for the present heterogeneous data. The Biophysical Society of Japan (BSJ) 2009-10-27 /pmc/articles/PMC5036638/ /pubmed/27857580 http://dx.doi.org/10.2142/biophysics.5.59 Text en 2009 © The Biophysical Society of Japan This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Articles
Suda, Hitoshi
Shoyama, Tetsuji
Shimizu, Yuka
Analyzing observed or hidden heterogeneity on survival and mortality in an isogenic C. elegans cohort
title Analyzing observed or hidden heterogeneity on survival and mortality in an isogenic C. elegans cohort
title_full Analyzing observed or hidden heterogeneity on survival and mortality in an isogenic C. elegans cohort
title_fullStr Analyzing observed or hidden heterogeneity on survival and mortality in an isogenic C. elegans cohort
title_full_unstemmed Analyzing observed or hidden heterogeneity on survival and mortality in an isogenic C. elegans cohort
title_short Analyzing observed or hidden heterogeneity on survival and mortality in an isogenic C. elegans cohort
title_sort analyzing observed or hidden heterogeneity on survival and mortality in an isogenic c. elegans cohort
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5036638/
https://www.ncbi.nlm.nih.gov/pubmed/27857580
http://dx.doi.org/10.2142/biophysics.5.59
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