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Chemophoresis as a driving force for intracellular organization: Theory and application to plasmid partitioning
Biological units such as macromolecules, organelles, and cells are directed to a proper location by gradients of chemicals. We consider a macroscopic element with surface binding sites where chemical adsorption reactions can occur and show that a thermodynamic force generated by chemical gradients a...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Biophysical Society of Japan (BSJ)
2011
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5036777/ https://www.ncbi.nlm.nih.gov/pubmed/27857595 http://dx.doi.org/10.2142/biophysics.7.77 |
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author | Sugawara, Takeshi Kaneko, Kunihiko |
author_facet | Sugawara, Takeshi Kaneko, Kunihiko |
author_sort | Sugawara, Takeshi |
collection | PubMed |
description | Biological units such as macromolecules, organelles, and cells are directed to a proper location by gradients of chemicals. We consider a macroscopic element with surface binding sites where chemical adsorption reactions can occur and show that a thermodynamic force generated by chemical gradients acts on the element. By assuming local equilibrium and adopting the grand potential used in thermodynamics, we derive a formula for the “chemophoresis” force, which depends on chemical potential gradients and the Langmuir isotherm. The conditions under which the formula is applicable are shown to occur in intracellular reactions. Further, the role of the chemophoresis in the partitioning of bacterial chromosomal loci/plasmids during cell division is discussed. By performing numerical simulations, we demonstrate that the chemophoresis force can contribute to the regular positioning of plasmids observed in experiments. |
format | Online Article Text |
id | pubmed-5036777 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | The Biophysical Society of Japan (BSJ) |
record_format | MEDLINE/PubMed |
spelling | pubmed-50367772016-11-17 Chemophoresis as a driving force for intracellular organization: Theory and application to plasmid partitioning Sugawara, Takeshi Kaneko, Kunihiko Biophysics (Nagoya-shi) Articles Biological units such as macromolecules, organelles, and cells are directed to a proper location by gradients of chemicals. We consider a macroscopic element with surface binding sites where chemical adsorption reactions can occur and show that a thermodynamic force generated by chemical gradients acts on the element. By assuming local equilibrium and adopting the grand potential used in thermodynamics, we derive a formula for the “chemophoresis” force, which depends on chemical potential gradients and the Langmuir isotherm. The conditions under which the formula is applicable are shown to occur in intracellular reactions. Further, the role of the chemophoresis in the partitioning of bacterial chromosomal loci/plasmids during cell division is discussed. By performing numerical simulations, we demonstrate that the chemophoresis force can contribute to the regular positioning of plasmids observed in experiments. The Biophysical Society of Japan (BSJ) 2011-09-11 /pmc/articles/PMC5036777/ /pubmed/27857595 http://dx.doi.org/10.2142/biophysics.7.77 Text en 2011 © The Biophysical Society of Japan This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Articles Sugawara, Takeshi Kaneko, Kunihiko Chemophoresis as a driving force for intracellular organization: Theory and application to plasmid partitioning |
title | Chemophoresis as a driving force for intracellular organization: Theory and application to plasmid partitioning |
title_full | Chemophoresis as a driving force for intracellular organization: Theory and application to plasmid partitioning |
title_fullStr | Chemophoresis as a driving force for intracellular organization: Theory and application to plasmid partitioning |
title_full_unstemmed | Chemophoresis as a driving force for intracellular organization: Theory and application to plasmid partitioning |
title_short | Chemophoresis as a driving force for intracellular organization: Theory and application to plasmid partitioning |
title_sort | chemophoresis as a driving force for intracellular organization: theory and application to plasmid partitioning |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5036777/ https://www.ncbi.nlm.nih.gov/pubmed/27857595 http://dx.doi.org/10.2142/biophysics.7.77 |
work_keys_str_mv | AT sugawaratakeshi chemophoresisasadrivingforceforintracellularorganizationtheoryandapplicationtoplasmidpartitioning AT kanekokunihiko chemophoresisasadrivingforceforintracellularorganizationtheoryandapplicationtoplasmidpartitioning |