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Matrix-assisted laser desorption ionization-time of flight mass spectrometry based identification of Edwardsiella ictaluri isolated from Vietnamese striped catfish (Pangasius hypothalamus)
Edwardsiella (E.) ictaluri is a major bacterial pathogen that affects commercially farmed striped catfish (Pangasius hypothalamus) in Vietnam. In a previous study, 19 strains of E. ictaluri collected from striped catfish were biochemically identified with an API-20E system. Here, the same 19 strains...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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The Korean Society of Veterinary Science
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5037306/ https://www.ncbi.nlm.nih.gov/pubmed/26726022 http://dx.doi.org/10.4142/jvs.2016.17.3.377 |
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author | Nhu, Truong Quynh Park, Seong Bin Kim, Si Won Lee, Jung Seok Im, Se Pyeong Lazarte, Jassy Mary S. Seo, Jong Pyo Lee, Woo-Jai Kim, Jae Sung Jung, Tae Sung |
author_facet | Nhu, Truong Quynh Park, Seong Bin Kim, Si Won Lee, Jung Seok Im, Se Pyeong Lazarte, Jassy Mary S. Seo, Jong Pyo Lee, Woo-Jai Kim, Jae Sung Jung, Tae Sung |
author_sort | Nhu, Truong Quynh |
collection | PubMed |
description | Edwardsiella (E.) ictaluri is a major bacterial pathogen that affects commercially farmed striped catfish (Pangasius hypothalamus) in Vietnam. In a previous study, 19 strains of E. ictaluri collected from striped catfish were biochemically identified with an API-20E system. Here, the same 19 strains were used to assess the ability of matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF MS; applied using a MALDI Biotyper) to conduct rapid, easy and accurate identification of E. ictaluri. MALDI-TOF MS could directly detect the specific peptide patterns of cultured E. ictaluri colonies with high (> 2.0, indicating species-level identification) scores. MALDI Biotyper 3.0 software revealed that all of the strains examined in this study possessed highly similar peptide peak patterns. In addition, electrophoresis (SDS-PAGE) and subsequent immuno-blotting using a specific chicken antibody (IgY) against E. ictaluri revealed that the isolates had highly similar protein profiles and antigenic banding profiles. The results of this study suggest that E. ictaluri isolated from striped catfish in Vietnam have homologous protein compositions. This is important, because it indicates that MALDI-TOF MS analysis could potentially outperform the conventional methods of identifying E. ictaluri. |
format | Online Article Text |
id | pubmed-5037306 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | The Korean Society of Veterinary Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-50373062016-09-29 Matrix-assisted laser desorption ionization-time of flight mass spectrometry based identification of Edwardsiella ictaluri isolated from Vietnamese striped catfish (Pangasius hypothalamus) Nhu, Truong Quynh Park, Seong Bin Kim, Si Won Lee, Jung Seok Im, Se Pyeong Lazarte, Jassy Mary S. Seo, Jong Pyo Lee, Woo-Jai Kim, Jae Sung Jung, Tae Sung J Vet Sci Original Article Edwardsiella (E.) ictaluri is a major bacterial pathogen that affects commercially farmed striped catfish (Pangasius hypothalamus) in Vietnam. In a previous study, 19 strains of E. ictaluri collected from striped catfish were biochemically identified with an API-20E system. Here, the same 19 strains were used to assess the ability of matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF MS; applied using a MALDI Biotyper) to conduct rapid, easy and accurate identification of E. ictaluri. MALDI-TOF MS could directly detect the specific peptide patterns of cultured E. ictaluri colonies with high (> 2.0, indicating species-level identification) scores. MALDI Biotyper 3.0 software revealed that all of the strains examined in this study possessed highly similar peptide peak patterns. In addition, electrophoresis (SDS-PAGE) and subsequent immuno-blotting using a specific chicken antibody (IgY) against E. ictaluri revealed that the isolates had highly similar protein profiles and antigenic banding profiles. The results of this study suggest that E. ictaluri isolated from striped catfish in Vietnam have homologous protein compositions. This is important, because it indicates that MALDI-TOF MS analysis could potentially outperform the conventional methods of identifying E. ictaluri. The Korean Society of Veterinary Science 2016-09 2016-09-20 /pmc/articles/PMC5037306/ /pubmed/26726022 http://dx.doi.org/10.4142/jvs.2016.17.3.377 Text en © 2016 The Korean Society of Veterinary Science. http://creativecommons.org/licenses/by-nc/4.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Article Nhu, Truong Quynh Park, Seong Bin Kim, Si Won Lee, Jung Seok Im, Se Pyeong Lazarte, Jassy Mary S. Seo, Jong Pyo Lee, Woo-Jai Kim, Jae Sung Jung, Tae Sung Matrix-assisted laser desorption ionization-time of flight mass spectrometry based identification of Edwardsiella ictaluri isolated from Vietnamese striped catfish (Pangasius hypothalamus) |
title | Matrix-assisted laser desorption ionization-time of flight mass spectrometry based identification of Edwardsiella ictaluri isolated from Vietnamese striped catfish (Pangasius hypothalamus) |
title_full | Matrix-assisted laser desorption ionization-time of flight mass spectrometry based identification of Edwardsiella ictaluri isolated from Vietnamese striped catfish (Pangasius hypothalamus) |
title_fullStr | Matrix-assisted laser desorption ionization-time of flight mass spectrometry based identification of Edwardsiella ictaluri isolated from Vietnamese striped catfish (Pangasius hypothalamus) |
title_full_unstemmed | Matrix-assisted laser desorption ionization-time of flight mass spectrometry based identification of Edwardsiella ictaluri isolated from Vietnamese striped catfish (Pangasius hypothalamus) |
title_short | Matrix-assisted laser desorption ionization-time of flight mass spectrometry based identification of Edwardsiella ictaluri isolated from Vietnamese striped catfish (Pangasius hypothalamus) |
title_sort | matrix-assisted laser desorption ionization-time of flight mass spectrometry based identification of edwardsiella ictaluri isolated from vietnamese striped catfish (pangasius hypothalamus) |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5037306/ https://www.ncbi.nlm.nih.gov/pubmed/26726022 http://dx.doi.org/10.4142/jvs.2016.17.3.377 |
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