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Identifying anticancer peptides by using improved hybrid compositions

Cancer is one of the main causes of threats to human life. Identification of anticancer peptides is important for developing effective anticancer drugs. In this paper, we developed an improved predictor to identify the anticancer peptides. The amino acid composition (AAC), the average chemical shift...

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Detalles Bibliográficos
Autores principales: Li, Feng-Min, Wang, Xiao-Qian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5037382/
https://www.ncbi.nlm.nih.gov/pubmed/27670968
http://dx.doi.org/10.1038/srep33910
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author Li, Feng-Min
Wang, Xiao-Qian
author_facet Li, Feng-Min
Wang, Xiao-Qian
author_sort Li, Feng-Min
collection PubMed
description Cancer is one of the main causes of threats to human life. Identification of anticancer peptides is important for developing effective anticancer drugs. In this paper, we developed an improved predictor to identify the anticancer peptides. The amino acid composition (AAC), the average chemical shifts (acACS) and the reduced amino acid composition (RAAC) were selected to predict the anticancer peptides by using the support vector machine (SVM). The overall prediction accuracy reaches to 93.61% in jackknife test. The results indicated that the combined parameter was helpful to the prediction for anticancer peptides.
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spelling pubmed-50373822016-09-30 Identifying anticancer peptides by using improved hybrid compositions Li, Feng-Min Wang, Xiao-Qian Sci Rep Article Cancer is one of the main causes of threats to human life. Identification of anticancer peptides is important for developing effective anticancer drugs. In this paper, we developed an improved predictor to identify the anticancer peptides. The amino acid composition (AAC), the average chemical shifts (acACS) and the reduced amino acid composition (RAAC) were selected to predict the anticancer peptides by using the support vector machine (SVM). The overall prediction accuracy reaches to 93.61% in jackknife test. The results indicated that the combined parameter was helpful to the prediction for anticancer peptides. Nature Publishing Group 2016-09-27 /pmc/articles/PMC5037382/ /pubmed/27670968 http://dx.doi.org/10.1038/srep33910 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Li, Feng-Min
Wang, Xiao-Qian
Identifying anticancer peptides by using improved hybrid compositions
title Identifying anticancer peptides by using improved hybrid compositions
title_full Identifying anticancer peptides by using improved hybrid compositions
title_fullStr Identifying anticancer peptides by using improved hybrid compositions
title_full_unstemmed Identifying anticancer peptides by using improved hybrid compositions
title_short Identifying anticancer peptides by using improved hybrid compositions
title_sort identifying anticancer peptides by using improved hybrid compositions
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5037382/
https://www.ncbi.nlm.nih.gov/pubmed/27670968
http://dx.doi.org/10.1038/srep33910
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