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Visual Interpretation of Biomedical Time Series Using Parzen Window-Based Density-Amplitude Domain Transformation

This study proposes a new method suitable for the visual analysis of biomedical time series that is based on the examination of biomedical signals in the density-amplitude domain. Toward this goal, we employed two publicly available datasets. In the first stage of the study, density coefficients wer...

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Detalles Bibliográficos
Autores principales: Akben, Selahaddin Batuhan, Alkan, Ahmet
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5040451/
https://www.ncbi.nlm.nih.gov/pubmed/27683252
http://dx.doi.org/10.1371/journal.pone.0163569
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author Akben, Selahaddin Batuhan
Alkan, Ahmet
author_facet Akben, Selahaddin Batuhan
Alkan, Ahmet
author_sort Akben, Selahaddin Batuhan
collection PubMed
description This study proposes a new method suitable for the visual analysis of biomedical time series that is based on the examination of biomedical signals in the density-amplitude domain. Toward this goal, we employed two publicly available datasets. In the first stage of the study, density coefficients were computed separately by using the Parzen Windowing method for each class of raw attribute data. Then, differences between classes were determined visually by using density coefficients and their related amplitudes. Visual interpretation of the processed data gave more successful classification results compared with the raw data in the first stage. Next the density-amplitude representations of the raw data were classified using classifiers (SVM, KNN and Naïve Bayes). The raw data (time-amplitude) and their frequency-amplitude representation were also classified using the same classification methods. The statistical results showed that the proposed method based on the density-amplitude representation increases the classification success up to 55% compared with methods using the time-amplitude domain and up to 75% compared with methods based on the frequency-amplitude domain. Finally, we have highlighted several statistical analysis suggestions as a result of the density-amplitude representation.
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spelling pubmed-50404512016-10-27 Visual Interpretation of Biomedical Time Series Using Parzen Window-Based Density-Amplitude Domain Transformation Akben, Selahaddin Batuhan Alkan, Ahmet PLoS One Research Article This study proposes a new method suitable for the visual analysis of biomedical time series that is based on the examination of biomedical signals in the density-amplitude domain. Toward this goal, we employed two publicly available datasets. In the first stage of the study, density coefficients were computed separately by using the Parzen Windowing method for each class of raw attribute data. Then, differences between classes were determined visually by using density coefficients and their related amplitudes. Visual interpretation of the processed data gave more successful classification results compared with the raw data in the first stage. Next the density-amplitude representations of the raw data were classified using classifiers (SVM, KNN and Naïve Bayes). The raw data (time-amplitude) and their frequency-amplitude representation were also classified using the same classification methods. The statistical results showed that the proposed method based on the density-amplitude representation increases the classification success up to 55% compared with methods using the time-amplitude domain and up to 75% compared with methods based on the frequency-amplitude domain. Finally, we have highlighted several statistical analysis suggestions as a result of the density-amplitude representation. Public Library of Science 2016-09-28 /pmc/articles/PMC5040451/ /pubmed/27683252 http://dx.doi.org/10.1371/journal.pone.0163569 Text en © 2016 Akben, Alkan http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Akben, Selahaddin Batuhan
Alkan, Ahmet
Visual Interpretation of Biomedical Time Series Using Parzen Window-Based Density-Amplitude Domain Transformation
title Visual Interpretation of Biomedical Time Series Using Parzen Window-Based Density-Amplitude Domain Transformation
title_full Visual Interpretation of Biomedical Time Series Using Parzen Window-Based Density-Amplitude Domain Transformation
title_fullStr Visual Interpretation of Biomedical Time Series Using Parzen Window-Based Density-Amplitude Domain Transformation
title_full_unstemmed Visual Interpretation of Biomedical Time Series Using Parzen Window-Based Density-Amplitude Domain Transformation
title_short Visual Interpretation of Biomedical Time Series Using Parzen Window-Based Density-Amplitude Domain Transformation
title_sort visual interpretation of biomedical time series using parzen window-based density-amplitude domain transformation
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5040451/
https://www.ncbi.nlm.nih.gov/pubmed/27683252
http://dx.doi.org/10.1371/journal.pone.0163569
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