Cargando…
Molecular dynamics analysis to evaluate docking pose prediction
The accurate prediction of a ligand–protein complex structure is important for computer-assisted drug development. Although many docking methods have been developed over the last three decades, the success of binding structure prediction remains greatly limited. The purpose of this study was to demo...
Autores principales: | Sakano, Takako, Mahamood, Md. Iqbal, Yamashita, Takefumi, Fujitani, Hideaki |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Biophysical Society of Japan (BSJ)
2016
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5042163/ https://www.ncbi.nlm.nih.gov/pubmed/27924273 http://dx.doi.org/10.2142/biophysico.13.0_181 |
Ejemplares similares
-
Ligand Pose and Orientational Sampling in Molecular Docking
por: Coleman, Ryan G., et al.
Publicado: (2013) -
Prediction of binding poses to FXR using multi-targeted docking combined with molecular dynamics and enhanced sampling
por: Bhakat, Soumendranath, et al.
Publicado: (2017) -
Evaluation of the IKKβ Binding of Indicaxanthin by Induced-Fit Docking, Binding Pose Metadynamics, and Molecular Dynamics
por: Allegra, Mario, et al.
Publicado: (2021) -
The impact of cross-docked poses on performance of machine learning classifier for protein–ligand binding pose prediction
por: Shen, Chao, et al.
Publicado: (2021) -
Postprocessing of molecular docking poses using binding free energy calculations
por: Wichapong, Kanin, et al.
Publicado: (2012)