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SMC4, which is essentially involved in lung development, is associated with lung adenocarcinoma progression
Structural maintenance of chromosome 4 (SMC4) is a core subunit of condensin complexes that mainly contributes to chromosome condensation and segregation. Our previous study demonstrated that the gene expression profile during lung development is of great values for the study of lung cancer. In this...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5043270/ https://www.ncbi.nlm.nih.gov/pubmed/27687868 http://dx.doi.org/10.1038/srep34508 |
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author | Zhang, Chengli Kuang, Manchao Li, Meng Feng, Lin Zhang, Kaitai Cheng, Shujun |
author_facet | Zhang, Chengli Kuang, Manchao Li, Meng Feng, Lin Zhang, Kaitai Cheng, Shujun |
author_sort | Zhang, Chengli |
collection | PubMed |
description | Structural maintenance of chromosome 4 (SMC4) is a core subunit of condensin complexes that mainly contributes to chromosome condensation and segregation. Our previous study demonstrated that the gene expression profile during lung development is of great values for the study of lung cancer. In this study, we identified SMC4 through co-expression network analysis and clique percolation clustering using genes that constant changes during four stages of lung development. Gene ontology and KEGG pathway enrichment analysis demonstrated that SMC4 is closely related to cell cycle, cell adhesion, and RNA processing in lung development and carcinogenesis. Moreover, SMC4 is overexpressed in lung adenocarcinoma tissues and acts as an independent prognostic factor. SMC4 knockdown significantly inhibits the proliferation and invasion of A549 cells. Furthermore, we found that SMC4 interacts with DDX46 (DEAD-box helicase 46). In conclusion, the pivotal role of SMC4 in lung development and carcinogenesis suggests that genes with a similar expression pattern to SMC4 in lung development may also contribute to lung cancer progression. The identification of genes that are essentially involved in development through a comparative study between development and cancer may be a practical strategy for discovering potential biomarkers and illuminating the mechanisms of carcinogenesis. |
format | Online Article Text |
id | pubmed-5043270 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-50432702016-10-05 SMC4, which is essentially involved in lung development, is associated with lung adenocarcinoma progression Zhang, Chengli Kuang, Manchao Li, Meng Feng, Lin Zhang, Kaitai Cheng, Shujun Sci Rep Article Structural maintenance of chromosome 4 (SMC4) is a core subunit of condensin complexes that mainly contributes to chromosome condensation and segregation. Our previous study demonstrated that the gene expression profile during lung development is of great values for the study of lung cancer. In this study, we identified SMC4 through co-expression network analysis and clique percolation clustering using genes that constant changes during four stages of lung development. Gene ontology and KEGG pathway enrichment analysis demonstrated that SMC4 is closely related to cell cycle, cell adhesion, and RNA processing in lung development and carcinogenesis. Moreover, SMC4 is overexpressed in lung adenocarcinoma tissues and acts as an independent prognostic factor. SMC4 knockdown significantly inhibits the proliferation and invasion of A549 cells. Furthermore, we found that SMC4 interacts with DDX46 (DEAD-box helicase 46). In conclusion, the pivotal role of SMC4 in lung development and carcinogenesis suggests that genes with a similar expression pattern to SMC4 in lung development may also contribute to lung cancer progression. The identification of genes that are essentially involved in development through a comparative study between development and cancer may be a practical strategy for discovering potential biomarkers and illuminating the mechanisms of carcinogenesis. Nature Publishing Group 2016-09-30 /pmc/articles/PMC5043270/ /pubmed/27687868 http://dx.doi.org/10.1038/srep34508 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Zhang, Chengli Kuang, Manchao Li, Meng Feng, Lin Zhang, Kaitai Cheng, Shujun SMC4, which is essentially involved in lung development, is associated with lung adenocarcinoma progression |
title | SMC4, which is essentially involved in lung development, is associated with lung adenocarcinoma progression |
title_full | SMC4, which is essentially involved in lung development, is associated with lung adenocarcinoma progression |
title_fullStr | SMC4, which is essentially involved in lung development, is associated with lung adenocarcinoma progression |
title_full_unstemmed | SMC4, which is essentially involved in lung development, is associated with lung adenocarcinoma progression |
title_short | SMC4, which is essentially involved in lung development, is associated with lung adenocarcinoma progression |
title_sort | smc4, which is essentially involved in lung development, is associated with lung adenocarcinoma progression |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5043270/ https://www.ncbi.nlm.nih.gov/pubmed/27687868 http://dx.doi.org/10.1038/srep34508 |
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