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Adjusting for overdispersion in piecewise exponential regression models to estimate excess mortality rate in population-based research
BACKGROUND: In population-based cancer research, piecewise exponential regression models are used to derive adjusted estimates of excess mortality due to cancer using the Poisson generalized linear modelling framework. However, the assumption that the conditional mean and variance of the rate parame...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5045632/ https://www.ncbi.nlm.nih.gov/pubmed/27716079 http://dx.doi.org/10.1186/s12874-016-0234-z |
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author | Luque-Fernandez, Miguel Angel Belot, Aurélien Quaresma, Manuela Maringe, Camille Coleman, Michel P. Rachet, Bernard |
author_facet | Luque-Fernandez, Miguel Angel Belot, Aurélien Quaresma, Manuela Maringe, Camille Coleman, Michel P. Rachet, Bernard |
author_sort | Luque-Fernandez, Miguel Angel |
collection | PubMed |
description | BACKGROUND: In population-based cancer research, piecewise exponential regression models are used to derive adjusted estimates of excess mortality due to cancer using the Poisson generalized linear modelling framework. However, the assumption that the conditional mean and variance of the rate parameter given the set of covariates x (i) are equal is strong and may fail to account for overdispersion given the variability of the rate parameter (the variance exceeds the mean). Using an empirical example, we aimed to describe simple methods to test and correct for overdispersion. METHODS: We used a regression-based score test for overdispersion under the relative survival framework and proposed different approaches to correct for overdispersion including a quasi-likelihood, robust standard errors estimation, negative binomial regression and flexible piecewise modelling. RESULTS: All piecewise exponential regression models showed the presence of significant inherent overdispersion (p-value <0.001). However, the flexible piecewise exponential model showed the smallest overdispersion parameter (3.2 versus 21.3) for non-flexible piecewise exponential models. CONCLUSION: We showed that there were no major differences between methods. However, using a flexible piecewise regression modelling, with either a quasi-likelihood or robust standard errors, was the best approach as it deals with both, overdispersion due to model misspecification and true or inherent overdispersion. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12874-016-0234-z) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-5045632 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-50456322016-10-12 Adjusting for overdispersion in piecewise exponential regression models to estimate excess mortality rate in population-based research Luque-Fernandez, Miguel Angel Belot, Aurélien Quaresma, Manuela Maringe, Camille Coleman, Michel P. Rachet, Bernard BMC Med Res Methodol Research Article BACKGROUND: In population-based cancer research, piecewise exponential regression models are used to derive adjusted estimates of excess mortality due to cancer using the Poisson generalized linear modelling framework. However, the assumption that the conditional mean and variance of the rate parameter given the set of covariates x (i) are equal is strong and may fail to account for overdispersion given the variability of the rate parameter (the variance exceeds the mean). Using an empirical example, we aimed to describe simple methods to test and correct for overdispersion. METHODS: We used a regression-based score test for overdispersion under the relative survival framework and proposed different approaches to correct for overdispersion including a quasi-likelihood, robust standard errors estimation, negative binomial regression and flexible piecewise modelling. RESULTS: All piecewise exponential regression models showed the presence of significant inherent overdispersion (p-value <0.001). However, the flexible piecewise exponential model showed the smallest overdispersion parameter (3.2 versus 21.3) for non-flexible piecewise exponential models. CONCLUSION: We showed that there were no major differences between methods. However, using a flexible piecewise regression modelling, with either a quasi-likelihood or robust standard errors, was the best approach as it deals with both, overdispersion due to model misspecification and true or inherent overdispersion. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12874-016-0234-z) contains supplementary material, which is available to authorized users. BioMed Central 2016-10-01 /pmc/articles/PMC5045632/ /pubmed/27716079 http://dx.doi.org/10.1186/s12874-016-0234-z Text en © The Author(s) 2016 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License(http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver(http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Article Luque-Fernandez, Miguel Angel Belot, Aurélien Quaresma, Manuela Maringe, Camille Coleman, Michel P. Rachet, Bernard Adjusting for overdispersion in piecewise exponential regression models to estimate excess mortality rate in population-based research |
title | Adjusting for overdispersion in piecewise exponential regression models to estimate excess mortality rate in population-based research |
title_full | Adjusting for overdispersion in piecewise exponential regression models to estimate excess mortality rate in population-based research |
title_fullStr | Adjusting for overdispersion in piecewise exponential regression models to estimate excess mortality rate in population-based research |
title_full_unstemmed | Adjusting for overdispersion in piecewise exponential regression models to estimate excess mortality rate in population-based research |
title_short | Adjusting for overdispersion in piecewise exponential regression models to estimate excess mortality rate in population-based research |
title_sort | adjusting for overdispersion in piecewise exponential regression models to estimate excess mortality rate in population-based research |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5045632/ https://www.ncbi.nlm.nih.gov/pubmed/27716079 http://dx.doi.org/10.1186/s12874-016-0234-z |
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