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Guinier peak analysis for visual and automated inspection of small-angle X-ray scattering data

The Guinier region in small-angle X-ray scattering (SAXS) defines the radius of gyration, R (g), and the forward scattering intensity, I(0). In Guinier peak analysis (GPA), the plot of qI(q) versus q (2) transforms the Guinier region into a characteristic peak for visual and automated inspection of...

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Autor principal: Putnam, Christopher D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5045725/
https://www.ncbi.nlm.nih.gov/pubmed/27738411
http://dx.doi.org/10.1107/S1600576716010906
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author Putnam, Christopher D.
author_facet Putnam, Christopher D.
author_sort Putnam, Christopher D.
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description The Guinier region in small-angle X-ray scattering (SAXS) defines the radius of gyration, R (g), and the forward scattering intensity, I(0). In Guinier peak analysis (GPA), the plot of qI(q) versus q (2) transforms the Guinier region into a characteristic peak for visual and automated inspection of data. Deviations of the peak position from the theoretical position in dimensionless GPA plots can suggest parameter errors, problematic low-resolution data, some kinds of intermolecular interactions or elongated scatters. To facilitate automated analysis by GPA, the elongation ratio (ER), which is the ratio of the areas in the pair-distribution function P(r) after and before the P(r) maximum, was characterized; symmetric samples have ER values around 1, and samples with ER values greater than 5 tend to be outliers in GPA analysis. Use of GPA+ER can be a helpful addition to SAXS data analysis pipelines.
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spelling pubmed-50457252016-10-13 Guinier peak analysis for visual and automated inspection of small-angle X-ray scattering data Putnam, Christopher D. J Appl Crystallogr Research Papers The Guinier region in small-angle X-ray scattering (SAXS) defines the radius of gyration, R (g), and the forward scattering intensity, I(0). In Guinier peak analysis (GPA), the plot of qI(q) versus q (2) transforms the Guinier region into a characteristic peak for visual and automated inspection of data. Deviations of the peak position from the theoretical position in dimensionless GPA plots can suggest parameter errors, problematic low-resolution data, some kinds of intermolecular interactions or elongated scatters. To facilitate automated analysis by GPA, the elongation ratio (ER), which is the ratio of the areas in the pair-distribution function P(r) after and before the P(r) maximum, was characterized; symmetric samples have ER values around 1, and samples with ER values greater than 5 tend to be outliers in GPA analysis. Use of GPA+ER can be a helpful addition to SAXS data analysis pipelines. International Union of Crystallography 2016-08-04 /pmc/articles/PMC5045725/ /pubmed/27738411 http://dx.doi.org/10.1107/S1600576716010906 Text en © Christopher D. Putnam 2016 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
spellingShingle Research Papers
Putnam, Christopher D.
Guinier peak analysis for visual and automated inspection of small-angle X-ray scattering data
title Guinier peak analysis for visual and automated inspection of small-angle X-ray scattering data
title_full Guinier peak analysis for visual and automated inspection of small-angle X-ray scattering data
title_fullStr Guinier peak analysis for visual and automated inspection of small-angle X-ray scattering data
title_full_unstemmed Guinier peak analysis for visual and automated inspection of small-angle X-ray scattering data
title_short Guinier peak analysis for visual and automated inspection of small-angle X-ray scattering data
title_sort guinier peak analysis for visual and automated inspection of small-angle x-ray scattering data
topic Research Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5045725/
https://www.ncbi.nlm.nih.gov/pubmed/27738411
http://dx.doi.org/10.1107/S1600576716010906
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