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ORDB, HORDE, ODORactor and other on-line knowledge resources of olfactory receptor-odorant interactions

We present here an exploration of the evolution of three well-established, web-based resources dedicated to the dissemination of information related to olfactory receptors (ORs) and their functional ligands, odorants. These resources are: the Olfactory Receptor Database (ORDB), the Human Olfactory D...

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Autores principales: Marenco, Luis, Wang, Rixin, McDougal, Robert, Olender, Tsviya, Twik, Michal, Bruford, Elspeth, Liu, Xinyi, Zhang, Jian, Lancet, Doron, Shepherd, Gordon, Crasto, Chiquito
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5045865/
https://www.ncbi.nlm.nih.gov/pubmed/27694208
http://dx.doi.org/10.1093/database/baw132
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author Marenco, Luis
Wang, Rixin
McDougal, Robert
Olender, Tsviya
Twik, Michal
Bruford, Elspeth
Liu, Xinyi
Zhang, Jian
Lancet, Doron
Shepherd, Gordon
Crasto, Chiquito
author_facet Marenco, Luis
Wang, Rixin
McDougal, Robert
Olender, Tsviya
Twik, Michal
Bruford, Elspeth
Liu, Xinyi
Zhang, Jian
Lancet, Doron
Shepherd, Gordon
Crasto, Chiquito
author_sort Marenco, Luis
collection PubMed
description We present here an exploration of the evolution of three well-established, web-based resources dedicated to the dissemination of information related to olfactory receptors (ORs) and their functional ligands, odorants. These resources are: the Olfactory Receptor Database (ORDB), the Human Olfactory Data Explorer (HORDE) and ODORactor. ORDB is a repository of genomic and proteomic information related to ORs and other chemosensory receptors, such as taste and pheromone receptors. Three companion databases closely integrated with ORDB are OdorDB, ORModelDB and OdorMapDB; these resources are part of the SenseLab suite of databases (http://senselab.med.yale.edu). HORDE (http://genome.weizmann.ac.il/horde/) is a semi-automatically populated database of the OR repertoires of human and several mammals. ODORactor (http://mdl.shsmu.edu.cn/ODORactor/) provides information related to OR-odorant interactions from the perspective of the odorant. All three resources are connected to each other via web-links. Database URL: http://senselab.med.yale.edu; http://genome.weizmann.ac.il/horde/; http://mdl.shsmu.edu.cn/ODORactor/
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spelling pubmed-50458652016-10-03 ORDB, HORDE, ODORactor and other on-line knowledge resources of olfactory receptor-odorant interactions Marenco, Luis Wang, Rixin McDougal, Robert Olender, Tsviya Twik, Michal Bruford, Elspeth Liu, Xinyi Zhang, Jian Lancet, Doron Shepherd, Gordon Crasto, Chiquito Database (Oxford) Database Update We present here an exploration of the evolution of three well-established, web-based resources dedicated to the dissemination of information related to olfactory receptors (ORs) and their functional ligands, odorants. These resources are: the Olfactory Receptor Database (ORDB), the Human Olfactory Data Explorer (HORDE) and ODORactor. ORDB is a repository of genomic and proteomic information related to ORs and other chemosensory receptors, such as taste and pheromone receptors. Three companion databases closely integrated with ORDB are OdorDB, ORModelDB and OdorMapDB; these resources are part of the SenseLab suite of databases (http://senselab.med.yale.edu). HORDE (http://genome.weizmann.ac.il/horde/) is a semi-automatically populated database of the OR repertoires of human and several mammals. ODORactor (http://mdl.shsmu.edu.cn/ODORactor/) provides information related to OR-odorant interactions from the perspective of the odorant. All three resources are connected to each other via web-links. Database URL: http://senselab.med.yale.edu; http://genome.weizmann.ac.il/horde/; http://mdl.shsmu.edu.cn/ODORactor/ Oxford University Press 2016-10-01 /pmc/articles/PMC5045865/ /pubmed/27694208 http://dx.doi.org/10.1093/database/baw132 Text en © The Author(s) 2016. Published by Oxford University Press. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Database Update
Marenco, Luis
Wang, Rixin
McDougal, Robert
Olender, Tsviya
Twik, Michal
Bruford, Elspeth
Liu, Xinyi
Zhang, Jian
Lancet, Doron
Shepherd, Gordon
Crasto, Chiquito
ORDB, HORDE, ODORactor and other on-line knowledge resources of olfactory receptor-odorant interactions
title ORDB, HORDE, ODORactor and other on-line knowledge resources of olfactory receptor-odorant interactions
title_full ORDB, HORDE, ODORactor and other on-line knowledge resources of olfactory receptor-odorant interactions
title_fullStr ORDB, HORDE, ODORactor and other on-line knowledge resources of olfactory receptor-odorant interactions
title_full_unstemmed ORDB, HORDE, ODORactor and other on-line knowledge resources of olfactory receptor-odorant interactions
title_short ORDB, HORDE, ODORactor and other on-line knowledge resources of olfactory receptor-odorant interactions
title_sort ordb, horde, odoractor and other on-line knowledge resources of olfactory receptor-odorant interactions
topic Database Update
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5045865/
https://www.ncbi.nlm.nih.gov/pubmed/27694208
http://dx.doi.org/10.1093/database/baw132
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