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ORDB, HORDE, ODORactor and other on-line knowledge resources of olfactory receptor-odorant interactions
We present here an exploration of the evolution of three well-established, web-based resources dedicated to the dissemination of information related to olfactory receptors (ORs) and their functional ligands, odorants. These resources are: the Olfactory Receptor Database (ORDB), the Human Olfactory D...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Oxford University Press
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5045865/ https://www.ncbi.nlm.nih.gov/pubmed/27694208 http://dx.doi.org/10.1093/database/baw132 |
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author | Marenco, Luis Wang, Rixin McDougal, Robert Olender, Tsviya Twik, Michal Bruford, Elspeth Liu, Xinyi Zhang, Jian Lancet, Doron Shepherd, Gordon Crasto, Chiquito |
author_facet | Marenco, Luis Wang, Rixin McDougal, Robert Olender, Tsviya Twik, Michal Bruford, Elspeth Liu, Xinyi Zhang, Jian Lancet, Doron Shepherd, Gordon Crasto, Chiquito |
author_sort | Marenco, Luis |
collection | PubMed |
description | We present here an exploration of the evolution of three well-established, web-based resources dedicated to the dissemination of information related to olfactory receptors (ORs) and their functional ligands, odorants. These resources are: the Olfactory Receptor Database (ORDB), the Human Olfactory Data Explorer (HORDE) and ODORactor. ORDB is a repository of genomic and proteomic information related to ORs and other chemosensory receptors, such as taste and pheromone receptors. Three companion databases closely integrated with ORDB are OdorDB, ORModelDB and OdorMapDB; these resources are part of the SenseLab suite of databases (http://senselab.med.yale.edu). HORDE (http://genome.weizmann.ac.il/horde/) is a semi-automatically populated database of the OR repertoires of human and several mammals. ODORactor (http://mdl.shsmu.edu.cn/ODORactor/) provides information related to OR-odorant interactions from the perspective of the odorant. All three resources are connected to each other via web-links. Database URL: http://senselab.med.yale.edu; http://genome.weizmann.ac.il/horde/; http://mdl.shsmu.edu.cn/ODORactor/ |
format | Online Article Text |
id | pubmed-5045865 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-50458652016-10-03 ORDB, HORDE, ODORactor and other on-line knowledge resources of olfactory receptor-odorant interactions Marenco, Luis Wang, Rixin McDougal, Robert Olender, Tsviya Twik, Michal Bruford, Elspeth Liu, Xinyi Zhang, Jian Lancet, Doron Shepherd, Gordon Crasto, Chiquito Database (Oxford) Database Update We present here an exploration of the evolution of three well-established, web-based resources dedicated to the dissemination of information related to olfactory receptors (ORs) and their functional ligands, odorants. These resources are: the Olfactory Receptor Database (ORDB), the Human Olfactory Data Explorer (HORDE) and ODORactor. ORDB is a repository of genomic and proteomic information related to ORs and other chemosensory receptors, such as taste and pheromone receptors. Three companion databases closely integrated with ORDB are OdorDB, ORModelDB and OdorMapDB; these resources are part of the SenseLab suite of databases (http://senselab.med.yale.edu). HORDE (http://genome.weizmann.ac.il/horde/) is a semi-automatically populated database of the OR repertoires of human and several mammals. ODORactor (http://mdl.shsmu.edu.cn/ODORactor/) provides information related to OR-odorant interactions from the perspective of the odorant. All three resources are connected to each other via web-links. Database URL: http://senselab.med.yale.edu; http://genome.weizmann.ac.il/horde/; http://mdl.shsmu.edu.cn/ODORactor/ Oxford University Press 2016-10-01 /pmc/articles/PMC5045865/ /pubmed/27694208 http://dx.doi.org/10.1093/database/baw132 Text en © The Author(s) 2016. Published by Oxford University Press. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Database Update Marenco, Luis Wang, Rixin McDougal, Robert Olender, Tsviya Twik, Michal Bruford, Elspeth Liu, Xinyi Zhang, Jian Lancet, Doron Shepherd, Gordon Crasto, Chiquito ORDB, HORDE, ODORactor and other on-line knowledge resources of olfactory receptor-odorant interactions |
title | ORDB, HORDE, ODORactor and other on-line knowledge resources of olfactory receptor-odorant interactions |
title_full | ORDB, HORDE, ODORactor and other on-line knowledge resources of olfactory receptor-odorant interactions |
title_fullStr | ORDB, HORDE, ODORactor and other on-line knowledge resources of olfactory receptor-odorant interactions |
title_full_unstemmed | ORDB, HORDE, ODORactor and other on-line knowledge resources of olfactory receptor-odorant interactions |
title_short | ORDB, HORDE, ODORactor and other on-line knowledge resources of olfactory receptor-odorant interactions |
title_sort | ordb, horde, odoractor and other on-line knowledge resources of olfactory receptor-odorant interactions |
topic | Database Update |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5045865/ https://www.ncbi.nlm.nih.gov/pubmed/27694208 http://dx.doi.org/10.1093/database/baw132 |
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