Cargando…
NMR and structural data for Connexin 32 and Connexin 26 N-terminal peptides
In this article we present (1)H and (13)C chemical shift assignments, secondary structural propensity data and normalized temperature coefficient data for N-terminal peptides of Connexin 26 (Cx26), Cx26G12R and Cx32G12R mutants seen in syndromic deafness and Charcot Marie Tooth Disease respectively,...
Autores principales: | , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2016
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5048080/ https://www.ncbi.nlm.nih.gov/pubmed/27722188 http://dx.doi.org/10.1016/j.dib.2016.08.044 |
_version_ | 1782457533710991360 |
---|---|
author | Batir, Yuksel Bargiello, Thaddeus A. Dowd, Terry L. |
author_facet | Batir, Yuksel Bargiello, Thaddeus A. Dowd, Terry L. |
author_sort | Batir, Yuksel |
collection | PubMed |
description | In this article we present (1)H and (13)C chemical shift assignments, secondary structural propensity data and normalized temperature coefficient data for N-terminal peptides of Connexin 26 (Cx26), Cx26G12R and Cx32G12R mutants seen in syndromic deafness and Charcot Marie Tooth Disease respectively, published in “Structural Studies of N-Terminal Mutants of Connexin 26 and Connexin 32 Using 1H NMR Spectroscopy” (Y. Batir, T.A. Bargiello, T.L. Dowd, 2016) [1]. The mutation G12R affects the structure of both Cx26 and Cx32 peptides differently. We present data from secondary structure propensity chemical shift analysis which calculates a secondary structure propensity (SSP) score for both disordered or folded peptides and proteins using the difference between the (13)C secondary chemical shifts of the Cα and Cβ protons. This data supplements the calculated NMR structures from NOESY data [1]. We present and compare the SSP data for the Cx26 vs Cx26G12R peptides and the Cx32 and Cx32G12R peptides. In addition, we present plots of temperature coefficients obtained for Cx26, Cx26G12R and Cx32G12R peptides collected previously [1] and normalized to their random coil temperature coefficients, “Random coil 1H chemical shifts obtained as a function of temperature and trifluoroethanol concentration for the peptide series GGXGG” (G. Merutka, H.J. Dyson, P.E. Wright, 1995) [2]. Reductions in these normalized temperature coefficients are directly observable for residues in different segments of the peptide and this data informs on solvent accessibility of the NH protons and NH protons which may be more constrained due to the formation of H bonds. |
format | Online Article Text |
id | pubmed-5048080 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-50480802016-10-07 NMR and structural data for Connexin 32 and Connexin 26 N-terminal peptides Batir, Yuksel Bargiello, Thaddeus A. Dowd, Terry L. Data Brief Data Article In this article we present (1)H and (13)C chemical shift assignments, secondary structural propensity data and normalized temperature coefficient data for N-terminal peptides of Connexin 26 (Cx26), Cx26G12R and Cx32G12R mutants seen in syndromic deafness and Charcot Marie Tooth Disease respectively, published in “Structural Studies of N-Terminal Mutants of Connexin 26 and Connexin 32 Using 1H NMR Spectroscopy” (Y. Batir, T.A. Bargiello, T.L. Dowd, 2016) [1]. The mutation G12R affects the structure of both Cx26 and Cx32 peptides differently. We present data from secondary structure propensity chemical shift analysis which calculates a secondary structure propensity (SSP) score for both disordered or folded peptides and proteins using the difference between the (13)C secondary chemical shifts of the Cα and Cβ protons. This data supplements the calculated NMR structures from NOESY data [1]. We present and compare the SSP data for the Cx26 vs Cx26G12R peptides and the Cx32 and Cx32G12R peptides. In addition, we present plots of temperature coefficients obtained for Cx26, Cx26G12R and Cx32G12R peptides collected previously [1] and normalized to their random coil temperature coefficients, “Random coil 1H chemical shifts obtained as a function of temperature and trifluoroethanol concentration for the peptide series GGXGG” (G. Merutka, H.J. Dyson, P.E. Wright, 1995) [2]. Reductions in these normalized temperature coefficients are directly observable for residues in different segments of the peptide and this data informs on solvent accessibility of the NH protons and NH protons which may be more constrained due to the formation of H bonds. Elsevier 2016-09-12 /pmc/articles/PMC5048080/ /pubmed/27722188 http://dx.doi.org/10.1016/j.dib.2016.08.044 Text en © 2016 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Data Article Batir, Yuksel Bargiello, Thaddeus A. Dowd, Terry L. NMR and structural data for Connexin 32 and Connexin 26 N-terminal peptides |
title | NMR and structural data for Connexin 32 and Connexin 26 N-terminal peptides |
title_full | NMR and structural data for Connexin 32 and Connexin 26 N-terminal peptides |
title_fullStr | NMR and structural data for Connexin 32 and Connexin 26 N-terminal peptides |
title_full_unstemmed | NMR and structural data for Connexin 32 and Connexin 26 N-terminal peptides |
title_short | NMR and structural data for Connexin 32 and Connexin 26 N-terminal peptides |
title_sort | nmr and structural data for connexin 32 and connexin 26 n-terminal peptides |
topic | Data Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5048080/ https://www.ncbi.nlm.nih.gov/pubmed/27722188 http://dx.doi.org/10.1016/j.dib.2016.08.044 |
work_keys_str_mv | AT batiryuksel nmrandstructuraldataforconnexin32andconnexin26nterminalpeptides AT bargiellothaddeusa nmrandstructuraldataforconnexin32andconnexin26nterminalpeptides AT dowdterryl nmrandstructuraldataforconnexin32andconnexin26nterminalpeptides |