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Nuclear DNA content in Miscanthus sp. and the geographical variation pattern in Miscanthus lutarioriparius

The genome sizes of five Miscanthus species, including 79 accessions of M. lutarioriparius, 8 of M. floridulus, 6 of M. sacchariflorus, 7 of M. sinensis, and 4 of M. × giganteus were examined using flow cytometry. The overall average nuclear DNA content were 4.256 ± 0.6 pg/2C in M. lutarioriparius,...

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Autores principales: Sheng, Jiajing, Hu, Xiaohu, Zeng, Xiaofei, Li, Ye, Zhou, Fasong, Hu, Zhongli, Jin, Surong, Diao, Ying
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5048105/
https://www.ncbi.nlm.nih.gov/pubmed/27698438
http://dx.doi.org/10.1038/srep34342
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author Sheng, Jiajing
Hu, Xiaohu
Zeng, Xiaofei
Li, Ye
Zhou, Fasong
Hu, Zhongli
Jin, Surong
Diao, Ying
author_facet Sheng, Jiajing
Hu, Xiaohu
Zeng, Xiaofei
Li, Ye
Zhou, Fasong
Hu, Zhongli
Jin, Surong
Diao, Ying
author_sort Sheng, Jiajing
collection PubMed
description The genome sizes of five Miscanthus species, including 79 accessions of M. lutarioriparius, 8 of M. floridulus, 6 of M. sacchariflorus, 7 of M. sinensis, and 4 of M. × giganteus were examined using flow cytometry. The overall average nuclear DNA content were 4.256 ± 0.6 pg/2C in M. lutarioriparius, 5.175 ± 0.3 pg/2C in M. floridulus, 3.956 ± 0.2 pg/2C in M. sacchariflorus, 5.272 ± 0.2 pg/2C in M. sinensis, and 6.932 ± 0.1 pg/2C in M. × giganteus. Interspecific variation was found at the diploid level, suggesting that DNA content might be a parameter that can be used to differentiate the species. Tetraploid populations were found in M. lutarioriparius, M. sacchariflorus, and M. sinensis, and their DNA content were 8.34 ± 1.2, 8.52, and 8.355 pg, respectively. The association between the DNA content of M. lutarioriparius, collected from representative ranges across the Yangtze River, and its geographic distribution was statistically analyzed. A consistent pattern of DNA content variation in 79 M. lutarioriparius accessions across its entire geographic range was found in this study. Along the Yangtze River, the DNA content of M. lutarioriparius tended to increase from the upstream to the downstream areas, and almost all tetraploids gathered in the upstream area extended to coastal regions.
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spelling pubmed-50481052016-10-11 Nuclear DNA content in Miscanthus sp. and the geographical variation pattern in Miscanthus lutarioriparius Sheng, Jiajing Hu, Xiaohu Zeng, Xiaofei Li, Ye Zhou, Fasong Hu, Zhongli Jin, Surong Diao, Ying Sci Rep Article The genome sizes of five Miscanthus species, including 79 accessions of M. lutarioriparius, 8 of M. floridulus, 6 of M. sacchariflorus, 7 of M. sinensis, and 4 of M. × giganteus were examined using flow cytometry. The overall average nuclear DNA content were 4.256 ± 0.6 pg/2C in M. lutarioriparius, 5.175 ± 0.3 pg/2C in M. floridulus, 3.956 ± 0.2 pg/2C in M. sacchariflorus, 5.272 ± 0.2 pg/2C in M. sinensis, and 6.932 ± 0.1 pg/2C in M. × giganteus. Interspecific variation was found at the diploid level, suggesting that DNA content might be a parameter that can be used to differentiate the species. Tetraploid populations were found in M. lutarioriparius, M. sacchariflorus, and M. sinensis, and their DNA content were 8.34 ± 1.2, 8.52, and 8.355 pg, respectively. The association between the DNA content of M. lutarioriparius, collected from representative ranges across the Yangtze River, and its geographic distribution was statistically analyzed. A consistent pattern of DNA content variation in 79 M. lutarioriparius accessions across its entire geographic range was found in this study. Along the Yangtze River, the DNA content of M. lutarioriparius tended to increase from the upstream to the downstream areas, and almost all tetraploids gathered in the upstream area extended to coastal regions. Nature Publishing Group 2016-10-04 /pmc/articles/PMC5048105/ /pubmed/27698438 http://dx.doi.org/10.1038/srep34342 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Sheng, Jiajing
Hu, Xiaohu
Zeng, Xiaofei
Li, Ye
Zhou, Fasong
Hu, Zhongli
Jin, Surong
Diao, Ying
Nuclear DNA content in Miscanthus sp. and the geographical variation pattern in Miscanthus lutarioriparius
title Nuclear DNA content in Miscanthus sp. and the geographical variation pattern in Miscanthus lutarioriparius
title_full Nuclear DNA content in Miscanthus sp. and the geographical variation pattern in Miscanthus lutarioriparius
title_fullStr Nuclear DNA content in Miscanthus sp. and the geographical variation pattern in Miscanthus lutarioriparius
title_full_unstemmed Nuclear DNA content in Miscanthus sp. and the geographical variation pattern in Miscanthus lutarioriparius
title_short Nuclear DNA content in Miscanthus sp. and the geographical variation pattern in Miscanthus lutarioriparius
title_sort nuclear dna content in miscanthus sp. and the geographical variation pattern in miscanthus lutarioriparius
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5048105/
https://www.ncbi.nlm.nih.gov/pubmed/27698438
http://dx.doi.org/10.1038/srep34342
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