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Co-acclimation of bacterial communities under stresses of hydrocarbons with different structures

Crude oil is a complex mixture of hydrocarbons with different structures; its components vary in bioavailability and toxicity. It is important to understand how bacterial communities response to different hydrocarbons and their co-acclimation in the process of degradation. In this study, microcosms...

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Detalles Bibliográficos
Autores principales: Wang, Hui, Wang, Bin, Dong, Wenwen, Hu, Xiaoke
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5048299/
https://www.ncbi.nlm.nih.gov/pubmed/27698451
http://dx.doi.org/10.1038/srep34588
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author Wang, Hui
Wang, Bin
Dong, Wenwen
Hu, Xiaoke
author_facet Wang, Hui
Wang, Bin
Dong, Wenwen
Hu, Xiaoke
author_sort Wang, Hui
collection PubMed
description Crude oil is a complex mixture of hydrocarbons with different structures; its components vary in bioavailability and toxicity. It is important to understand how bacterial communities response to different hydrocarbons and their co-acclimation in the process of degradation. In this study, microcosms with the addition of structurally different hydrocarbons were setup to investigate the successions of bacterial communities and the interactions between different bacterial taxa. Hydrocarbons were effectively degraded in all microcosms after 40 days. High-throughput sequencing offered a great quantity of data for analyzing successions of bacterial communities. The results indicated that the bacterial communities responded dramatically different to various hydrocarbons. KEGG database and PICRUSt were applied to predict functions of individual bacterial taxa and networks were constructed to analyze co-acclimations between functional bacterial groups. Almost all functional genes catalyzing degradation of different hydrocarbons were predicted in bacterial communities. Most of bacterial taxa were believed to conduct biodegradation processes via interactions with each other. This study addressed a few investigated area of bacterial community responses to structurally different organic pollutants and their co-acclimation and interactions in the process of biodegradation. The study could provide useful information to guide the bioremediation of crude oil pollution.
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spelling pubmed-50482992016-10-11 Co-acclimation of bacterial communities under stresses of hydrocarbons with different structures Wang, Hui Wang, Bin Dong, Wenwen Hu, Xiaoke Sci Rep Article Crude oil is a complex mixture of hydrocarbons with different structures; its components vary in bioavailability and toxicity. It is important to understand how bacterial communities response to different hydrocarbons and their co-acclimation in the process of degradation. In this study, microcosms with the addition of structurally different hydrocarbons were setup to investigate the successions of bacterial communities and the interactions between different bacterial taxa. Hydrocarbons were effectively degraded in all microcosms after 40 days. High-throughput sequencing offered a great quantity of data for analyzing successions of bacterial communities. The results indicated that the bacterial communities responded dramatically different to various hydrocarbons. KEGG database and PICRUSt were applied to predict functions of individual bacterial taxa and networks were constructed to analyze co-acclimations between functional bacterial groups. Almost all functional genes catalyzing degradation of different hydrocarbons were predicted in bacterial communities. Most of bacterial taxa were believed to conduct biodegradation processes via interactions with each other. This study addressed a few investigated area of bacterial community responses to structurally different organic pollutants and their co-acclimation and interactions in the process of biodegradation. The study could provide useful information to guide the bioremediation of crude oil pollution. Nature Publishing Group 2016-10-04 /pmc/articles/PMC5048299/ /pubmed/27698451 http://dx.doi.org/10.1038/srep34588 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Wang, Hui
Wang, Bin
Dong, Wenwen
Hu, Xiaoke
Co-acclimation of bacterial communities under stresses of hydrocarbons with different structures
title Co-acclimation of bacterial communities under stresses of hydrocarbons with different structures
title_full Co-acclimation of bacterial communities under stresses of hydrocarbons with different structures
title_fullStr Co-acclimation of bacterial communities under stresses of hydrocarbons with different structures
title_full_unstemmed Co-acclimation of bacterial communities under stresses of hydrocarbons with different structures
title_short Co-acclimation of bacterial communities under stresses of hydrocarbons with different structures
title_sort co-acclimation of bacterial communities under stresses of hydrocarbons with different structures
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5048299/
https://www.ncbi.nlm.nih.gov/pubmed/27698451
http://dx.doi.org/10.1038/srep34588
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