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Co-acclimation of bacterial communities under stresses of hydrocarbons with different structures
Crude oil is a complex mixture of hydrocarbons with different structures; its components vary in bioavailability and toxicity. It is important to understand how bacterial communities response to different hydrocarbons and their co-acclimation in the process of degradation. In this study, microcosms...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5048299/ https://www.ncbi.nlm.nih.gov/pubmed/27698451 http://dx.doi.org/10.1038/srep34588 |
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author | Wang, Hui Wang, Bin Dong, Wenwen Hu, Xiaoke |
author_facet | Wang, Hui Wang, Bin Dong, Wenwen Hu, Xiaoke |
author_sort | Wang, Hui |
collection | PubMed |
description | Crude oil is a complex mixture of hydrocarbons with different structures; its components vary in bioavailability and toxicity. It is important to understand how bacterial communities response to different hydrocarbons and their co-acclimation in the process of degradation. In this study, microcosms with the addition of structurally different hydrocarbons were setup to investigate the successions of bacterial communities and the interactions between different bacterial taxa. Hydrocarbons were effectively degraded in all microcosms after 40 days. High-throughput sequencing offered a great quantity of data for analyzing successions of bacterial communities. The results indicated that the bacterial communities responded dramatically different to various hydrocarbons. KEGG database and PICRUSt were applied to predict functions of individual bacterial taxa and networks were constructed to analyze co-acclimations between functional bacterial groups. Almost all functional genes catalyzing degradation of different hydrocarbons were predicted in bacterial communities. Most of bacterial taxa were believed to conduct biodegradation processes via interactions with each other. This study addressed a few investigated area of bacterial community responses to structurally different organic pollutants and their co-acclimation and interactions in the process of biodegradation. The study could provide useful information to guide the bioremediation of crude oil pollution. |
format | Online Article Text |
id | pubmed-5048299 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-50482992016-10-11 Co-acclimation of bacterial communities under stresses of hydrocarbons with different structures Wang, Hui Wang, Bin Dong, Wenwen Hu, Xiaoke Sci Rep Article Crude oil is a complex mixture of hydrocarbons with different structures; its components vary in bioavailability and toxicity. It is important to understand how bacterial communities response to different hydrocarbons and their co-acclimation in the process of degradation. In this study, microcosms with the addition of structurally different hydrocarbons were setup to investigate the successions of bacterial communities and the interactions between different bacterial taxa. Hydrocarbons were effectively degraded in all microcosms after 40 days. High-throughput sequencing offered a great quantity of data for analyzing successions of bacterial communities. The results indicated that the bacterial communities responded dramatically different to various hydrocarbons. KEGG database and PICRUSt were applied to predict functions of individual bacterial taxa and networks were constructed to analyze co-acclimations between functional bacterial groups. Almost all functional genes catalyzing degradation of different hydrocarbons were predicted in bacterial communities. Most of bacterial taxa were believed to conduct biodegradation processes via interactions with each other. This study addressed a few investigated area of bacterial community responses to structurally different organic pollutants and their co-acclimation and interactions in the process of biodegradation. The study could provide useful information to guide the bioremediation of crude oil pollution. Nature Publishing Group 2016-10-04 /pmc/articles/PMC5048299/ /pubmed/27698451 http://dx.doi.org/10.1038/srep34588 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Wang, Hui Wang, Bin Dong, Wenwen Hu, Xiaoke Co-acclimation of bacterial communities under stresses of hydrocarbons with different structures |
title | Co-acclimation of bacterial communities under stresses of hydrocarbons with different structures |
title_full | Co-acclimation of bacterial communities under stresses of hydrocarbons with different structures |
title_fullStr | Co-acclimation of bacterial communities under stresses of hydrocarbons with different structures |
title_full_unstemmed | Co-acclimation of bacterial communities under stresses of hydrocarbons with different structures |
title_short | Co-acclimation of bacterial communities under stresses of hydrocarbons with different structures |
title_sort | co-acclimation of bacterial communities under stresses of hydrocarbons with different structures |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5048299/ https://www.ncbi.nlm.nih.gov/pubmed/27698451 http://dx.doi.org/10.1038/srep34588 |
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