Cargando…

SNP Marker Discovery in Pima Cotton (Gossypium barbadense L.) Leaf Transcriptomes

The objective of this study was to explore the known narrow genetic diversity and discover single-nucleotide polymorphic (SNP) markers for marker-assisted breeding within Pima cotton (Gossypium barbadense L.) leaf transcriptomes. cDNA from 25-day plants of three diverse cotton genotypes [Pima S6 (PS...

Descripción completa

Detalles Bibliográficos
Autores principales:	Kottapalli, Pratibha, Ulloa, Mauricio, Kottapalli, Kameswara Rao, Payton, Paxton, Burke, John
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Libertas Academica 2016
Materias:	Original Research
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5049682/ https://www.ncbi.nlm.nih.gov/pubmed/27721653 http://dx.doi.org/10.4137/GEI.S40377

Ejemplares similares

Assembly and annotation of the Gossypium barbadense L. ‘Pima-S6’ genome raise questions about the chromosome structure and gene content of Gossypium barbadense genomes
por: Chávez Montes, Ricardo A., et al.
Publicado: (2023)

Bioinformatics Analysis of Small RNAs in Pima (Gossypium barbadense L.)
por: Hu, Hongtao, et al.
Publicado: (2015)

Identification of differentially expressed genes associated with semigamy in Pima cotton (Gossypium barbadense L.) through comparative microarray analysis
por: Curtiss, Jessica, et al.
Publicado: (2011)

Quantitative Trait Locus Mapping for Fusarium Wilt Race 4 Resistance in a Recombinant Inbred Line Population of Pima Cotton (Gossypium Barbadense)
por: Abdelraheem, Abdelraheem, et al.
Publicado: (2022)

Root-Knot Nematode Resistance in Gossypium hirsutum Determined by a Constitutive Defense-Response Transcriptional Program Avoiding a Fitness Penalty
por: Ojeda-Rivera, Jonathan Odilón, et al.
Publicado: (2022)

Transcriptome profiling of Gossypium barbadense inoculated with Verticillium dahliae provides a resource for cotton improvement
por: Zhang, Yan, et al.
Publicado: (2013)

Molecular Evolution and Expansion of the KUP Family in the Allopolyploid Cotton Species Gossypium hirsutum and Gossypium barbadense
por: Fan, Kai, et al.
Publicado: (2020)

Transcriptome Analysis Suggests That Chromosome Introgression Fragments from Sea Island Cotton (Gossypium barbadense) Increase Fiber Strength in Upland Cotton (Gossypium hirsutum)
por: Lu, Quanwei, et al.
Publicado: (2017)

Integrated Methylome and Transcriptome Analysis Widen the Knowledge of Cytoplasmic Male Sterility in Cotton (Gossypium barbadense L.)
por: You, Jingyi, et al.
Publicado: (2022)

Cotton Fiber Cell Walls of Gossypium hirsutum and Gossypium barbadense Have Differences Related to Loosely-Bound Xyloglucan
por: Avci, Utku, et al.
Publicado: (2013)

Construction of Gossypium barbadense Mutant Library Provides Genetic Resources for Cotton Germplasm Improvement
por: Abid, Muhammad Ali, et al.
Publicado: (2020)

Gene expression profiling in peanut using high density oligonucleotide microarrays
por: Payton, Paxton, et al.
Publicado: (2009)

Transcriptomic Analysis of Fiber Strength in Upland Cotton Chromosome Introgression Lines Carrying Different Gossypium barbadense Chromosomal Segments
por: Fang, Lei, et al.
Publicado: (2014)

Genetic diversity, linkage disequilibrium, and association mapping analyses of Gossypium barbadense L. germplasm
por: Abdullaev, Alisher A., et al.
Publicado: (2017)

Comparative transcriptome analysis of cotton fiber development of Upland cotton (Gossypium hirsutum) and Chromosome Segment Substitution Lines from G. hirsutum × G. barbadense
por: Li, Peng-tao, et al.
Publicado: (2017)

Functional analysis of GbAGL1, a D-lineage gene from cotton (Gossypium barbadense)
por: Liu, Xiang, et al.
Publicado: (2010)

Genome-Wide Identification of Cyclophilin Gene Family in Cotton and Expression Analysis of the Fibre Development in Gossypium barbadense
por: Chen, Qin, et al.
Publicado: (2019)

Diversity analysis of cotton (Gossypium hirsutum L.) germplasm using the CottonSNP63K Array
por: Hinze, Lori L., et al.
Publicado: (2017)

Characterization of a Novel Insect-Induced Sesquiterpene Synthase GbTPS1 Based on the Transcriptome of Gossypium barbadense Feeding by Cotton Bollworm
por: Zhang, Hang, et al.
Publicado: (2022)

Microtranscriptome analysis of sugarcane cultivars in response to aluminum stress
por: da Silva, Renan Gonçalves, et al.
Publicado: (2019)

Genetic dissection of the fuzzless seed trait in Gossypium barbadense
por: Zhu, Qian-Hao, et al.
Publicado: (2018)

The genome sequence of Sea-Island cotton (Gossypium barbadense) provides insights into the allopolyploidization and development of superior spinnable fibres
por: Yuan, Daojun, et al.
Publicado: (2015)

Overexpression of StDREB2 Transcription Factor Enhances Drought Stress Tolerance in Cotton (Gossypium barbadense L.)
por: El-Esawi, Mohamed A., et al.
Publicado: (2019)

Impact of Plant Spacing and Nitrogen Rates on Growth Characteristics and Yield Attributes of Egyptian Cotton (Gossypium barbadense L.)
por: Ibrahim, Ibrahim A. E., et al.
Publicado: (2022)

Genetic and phenotypic effects of chromosome segments introgressed from Gossypium barbadense into Gossypium hirsutum
por: Song, Weiwu, et al.
Publicado: (2017)

Identification and functional analysis of PIN family genes in Gossypium barbadense
por: Long, Yilei, et al.
Publicado: (2022)

Molecular Mechanisms Underlying Sugarcane Response to Aluminum Stress by RNA-Seq
por: Rosa-Santos, Thiago Mateus, et al.
Publicado: (2020)

Breeding Potential of Introgression Lines Developed from Interspecific Crossing between Upland Cotton (Gossypium hirsutum) and Gossypium barbadense: Heterosis, Combining Ability and Genetic Effects
por: Zhang, Jinfa, et al.
Publicado: (2016)

Global identification of natural antisense transcripts in Gossypium hirsutum and Gossypium barbadense under chilling stress
por: Feng, Shouli, et al.
Publicado: (2023)

Investigation of the Influence of Leaf Thickness on Canopy Reflectance and Physiological Traits in Upland and Pima Cotton Populations
por: Pauli, Duke, et al.
Publicado: (2017)

Gbvdr6, a Gene Encoding a Receptor-Like Protein of Cotton (Gossypium barbadense), Confers Resistance to Verticillium Wilt in Arabidopsis and Upland Cotton
por: Yang, Yuwen, et al.
Publicado: (2018)

Cotton fiber elongation network revealed by expression profiling of longer fiber lines introgressed with different Gossypium barbadense chromosome segments
por: Fang, Lei, et al.
Publicado: (2014)

The Chalcone Isomerase Family in Cotton: Whole-Genome Bioinformatic and Expression Analyses of the Gossypium barbadense L. Response to Fusarium Wilt Infection
por: Zu, Qian-Li, et al.
Publicado: (2019)

Rapid evolutionary divergence of Gossypium barbadense and G. hirsutum mitochondrial genomes
por: Tang, Mingyong, et al.
Publicado: (2015)

Meta-analysis of cotton fiber quality QTLs across diverse environments in a Gossypium hirsutum x G. barbadense RIL population
por: Lacape, Jean-Marc, et al.
Publicado: (2010)

Characterization of expressed sequence tags from developing fibers of Gossypium barbadense and evaluation of insertion-deletion variation in tetraploid cultivated cotton species
por: Lv, Yuanda, et al.
Publicado: (2013)

Genome-wide association analysis reveals loci and candidate genes involved in fiber quality traits in sea island cotton (Gossypium barbadense)
por: Su, Xiujuan, et al.
Publicado: (2020)

Comparative Analysis of the Cytology and Transcriptomes of the Cytoplasmic Male Sterility Line H276A and Its Maintainer Line H276B of Cotton (Gossypium barbadense L.)
por: Kong, Xiangjun, et al.
Publicado: (2017)

Transcriptomic and biochemical analysis of upland cotton (Gossypium hirsutum) and a chromosome segment substitution line from G. hirsutum × G. barbadense in response to Verticillium dahliae infection
por: Li, Peng-tao, et al.
Publicado: (2019)

Quantitative trait loci analysis of Verticillium wilt resistance in interspecific backcross populations of Gossypium hirsutum × Gossypium barbadense
por: Shi, Yuzhen, et al.
Publicado: (2016)

Cannot write session to /tmp/vufind_sessions/sess_i6o508m72i469tdgputehqd0ub