Cargando…

The Non-Linear Child: Ontogeny, Isoniazid Concentration, and NAT2 Genotype Modulate Enzyme Reaction Kinetics and Metabolism

N-acetyltransferase 2 (NAT2) catalyzes the acetylation of isoniazid to N-acetylisoniazid. NAT2 polymorphism explains 88% of isoniazid clearance variability in adults. We examined the effects of clinical and genetic factors on Michaelis-Menten reaction kinetic constants of maximum velocity (V(max)) a...

Descripción completa

Detalles Bibliográficos
Autores principales: Rogers, Zoe, Hiruy, Hiwot, Pasipanodya, Jotam G., Mbowane, Chris, Adamson, John, Ngotho, Lihle, Karim, Farina, Jeena, Prakash, Bishai, William, Gumbo, Tawanda
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5049930/
https://www.ncbi.nlm.nih.gov/pubmed/27528266
http://dx.doi.org/10.1016/j.ebiom.2016.07.031
_version_ 1782457807294955520
author Rogers, Zoe
Hiruy, Hiwot
Pasipanodya, Jotam G.
Mbowane, Chris
Adamson, John
Ngotho, Lihle
Karim, Farina
Jeena, Prakash
Bishai, William
Gumbo, Tawanda
author_facet Rogers, Zoe
Hiruy, Hiwot
Pasipanodya, Jotam G.
Mbowane, Chris
Adamson, John
Ngotho, Lihle
Karim, Farina
Jeena, Prakash
Bishai, William
Gumbo, Tawanda
author_sort Rogers, Zoe
collection PubMed
description N-acetyltransferase 2 (NAT2) catalyzes the acetylation of isoniazid to N-acetylisoniazid. NAT2 polymorphism explains 88% of isoniazid clearance variability in adults. We examined the effects of clinical and genetic factors on Michaelis-Menten reaction kinetic constants of maximum velocity (V(max)) and affinity (K(m)) in children 0–10 years old. We measured the rates of isoniazid elimination and N-acetylisoniazid production in the blood of 30 children. Since maturation effects could be non-linear, we utilized a pharmacometric approach and the artificial intelligence method, multivariate adaptive regression splines (MARS), to identify factors predicting NAT2 V(max) and K(m) by examining clinical, genetic, and laboratory factors in toto. Isoniazid concentration predicted both V(max) and K(m) and superseded the contribution of NAT2 genotype. Age non-linearly modified the NAT2 genotype contribution until maturation at ≥ 5.3 years. Thus, enzyme efficiency was constrained by substrate concentration, genes, and age. Since MARS output is in the form of basis functions and equations, it allows multiscale systems modeling from the level of cellular chemical reactions to whole body physiological parameters, by automatic selection of significant predictors by the algorithm.
format Online
Article
Text
id pubmed-5049930
institution National Center for Biotechnology Information
language English
publishDate 2016
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-50499302016-10-07 The Non-Linear Child: Ontogeny, Isoniazid Concentration, and NAT2 Genotype Modulate Enzyme Reaction Kinetics and Metabolism Rogers, Zoe Hiruy, Hiwot Pasipanodya, Jotam G. Mbowane, Chris Adamson, John Ngotho, Lihle Karim, Farina Jeena, Prakash Bishai, William Gumbo, Tawanda EBioMedicine Research Paper N-acetyltransferase 2 (NAT2) catalyzes the acetylation of isoniazid to N-acetylisoniazid. NAT2 polymorphism explains 88% of isoniazid clearance variability in adults. We examined the effects of clinical and genetic factors on Michaelis-Menten reaction kinetic constants of maximum velocity (V(max)) and affinity (K(m)) in children 0–10 years old. We measured the rates of isoniazid elimination and N-acetylisoniazid production in the blood of 30 children. Since maturation effects could be non-linear, we utilized a pharmacometric approach and the artificial intelligence method, multivariate adaptive regression splines (MARS), to identify factors predicting NAT2 V(max) and K(m) by examining clinical, genetic, and laboratory factors in toto. Isoniazid concentration predicted both V(max) and K(m) and superseded the contribution of NAT2 genotype. Age non-linearly modified the NAT2 genotype contribution until maturation at ≥ 5.3 years. Thus, enzyme efficiency was constrained by substrate concentration, genes, and age. Since MARS output is in the form of basis functions and equations, it allows multiscale systems modeling from the level of cellular chemical reactions to whole body physiological parameters, by automatic selection of significant predictors by the algorithm. Elsevier 2016-07-27 /pmc/articles/PMC5049930/ /pubmed/27528266 http://dx.doi.org/10.1016/j.ebiom.2016.07.031 Text en © 2016 Forschungsgesellschaft für Arbeitsphysiologie und Arbeitschutz e.V. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Research Paper
Rogers, Zoe
Hiruy, Hiwot
Pasipanodya, Jotam G.
Mbowane, Chris
Adamson, John
Ngotho, Lihle
Karim, Farina
Jeena, Prakash
Bishai, William
Gumbo, Tawanda
The Non-Linear Child: Ontogeny, Isoniazid Concentration, and NAT2 Genotype Modulate Enzyme Reaction Kinetics and Metabolism
title The Non-Linear Child: Ontogeny, Isoniazid Concentration, and NAT2 Genotype Modulate Enzyme Reaction Kinetics and Metabolism
title_full The Non-Linear Child: Ontogeny, Isoniazid Concentration, and NAT2 Genotype Modulate Enzyme Reaction Kinetics and Metabolism
title_fullStr The Non-Linear Child: Ontogeny, Isoniazid Concentration, and NAT2 Genotype Modulate Enzyme Reaction Kinetics and Metabolism
title_full_unstemmed The Non-Linear Child: Ontogeny, Isoniazid Concentration, and NAT2 Genotype Modulate Enzyme Reaction Kinetics and Metabolism
title_short The Non-Linear Child: Ontogeny, Isoniazid Concentration, and NAT2 Genotype Modulate Enzyme Reaction Kinetics and Metabolism
title_sort non-linear child: ontogeny, isoniazid concentration, and nat2 genotype modulate enzyme reaction kinetics and metabolism
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5049930/
https://www.ncbi.nlm.nih.gov/pubmed/27528266
http://dx.doi.org/10.1016/j.ebiom.2016.07.031
work_keys_str_mv AT rogerszoe thenonlinearchildontogenyisoniazidconcentrationandnat2genotypemodulateenzymereactionkineticsandmetabolism
AT hiruyhiwot thenonlinearchildontogenyisoniazidconcentrationandnat2genotypemodulateenzymereactionkineticsandmetabolism
AT pasipanodyajotamg thenonlinearchildontogenyisoniazidconcentrationandnat2genotypemodulateenzymereactionkineticsandmetabolism
AT mbowanechris thenonlinearchildontogenyisoniazidconcentrationandnat2genotypemodulateenzymereactionkineticsandmetabolism
AT adamsonjohn thenonlinearchildontogenyisoniazidconcentrationandnat2genotypemodulateenzymereactionkineticsandmetabolism
AT ngotholihle thenonlinearchildontogenyisoniazidconcentrationandnat2genotypemodulateenzymereactionkineticsandmetabolism
AT karimfarina thenonlinearchildontogenyisoniazidconcentrationandnat2genotypemodulateenzymereactionkineticsandmetabolism
AT jeenaprakash thenonlinearchildontogenyisoniazidconcentrationandnat2genotypemodulateenzymereactionkineticsandmetabolism
AT bishaiwilliam thenonlinearchildontogenyisoniazidconcentrationandnat2genotypemodulateenzymereactionkineticsandmetabolism
AT gumbotawanda thenonlinearchildontogenyisoniazidconcentrationandnat2genotypemodulateenzymereactionkineticsandmetabolism
AT rogerszoe nonlinearchildontogenyisoniazidconcentrationandnat2genotypemodulateenzymereactionkineticsandmetabolism
AT hiruyhiwot nonlinearchildontogenyisoniazidconcentrationandnat2genotypemodulateenzymereactionkineticsandmetabolism
AT pasipanodyajotamg nonlinearchildontogenyisoniazidconcentrationandnat2genotypemodulateenzymereactionkineticsandmetabolism
AT mbowanechris nonlinearchildontogenyisoniazidconcentrationandnat2genotypemodulateenzymereactionkineticsandmetabolism
AT adamsonjohn nonlinearchildontogenyisoniazidconcentrationandnat2genotypemodulateenzymereactionkineticsandmetabolism
AT ngotholihle nonlinearchildontogenyisoniazidconcentrationandnat2genotypemodulateenzymereactionkineticsandmetabolism
AT karimfarina nonlinearchildontogenyisoniazidconcentrationandnat2genotypemodulateenzymereactionkineticsandmetabolism
AT jeenaprakash nonlinearchildontogenyisoniazidconcentrationandnat2genotypemodulateenzymereactionkineticsandmetabolism
AT bishaiwilliam nonlinearchildontogenyisoniazidconcentrationandnat2genotypemodulateenzymereactionkineticsandmetabolism
AT gumbotawanda nonlinearchildontogenyisoniazidconcentrationandnat2genotypemodulateenzymereactionkineticsandmetabolism