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A comprehensive insight into functional profiles of free-living microbial community responses to a toxic Akashiwo sanguinea bloom
Phytoplankton blooms are a worldwide problem and can greatly affect ecological processes in aquatic systems, but its impacts on the functional potential of microbial communities are limited. In this study, a high-throughput microarray-based technology (GeoChip) was used to profile the functional pot...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5050414/ https://www.ncbi.nlm.nih.gov/pubmed/27703234 http://dx.doi.org/10.1038/srep34645 |
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author | Yang, Caiyun Li, Yi Zhou, Yanyan Lei, Xueqian Zheng, Wei Tian, Yun Van Nostrand, Joy D. He, Zhili Wu, Liyou Zhou, Jizhong Zheng, Tianling |
author_facet | Yang, Caiyun Li, Yi Zhou, Yanyan Lei, Xueqian Zheng, Wei Tian, Yun Van Nostrand, Joy D. He, Zhili Wu, Liyou Zhou, Jizhong Zheng, Tianling |
author_sort | Yang, Caiyun |
collection | PubMed |
description | Phytoplankton blooms are a worldwide problem and can greatly affect ecological processes in aquatic systems, but its impacts on the functional potential of microbial communities are limited. In this study, a high-throughput microarray-based technology (GeoChip) was used to profile the functional potential of free-living microbes from the Xiamen Sea Area in response to a 2011 Akashiwo sanguinea bloom. The bloom altered the overall community functional structure. Genes that were significantly (p < 0.05) increased during the bloom included carbon degradation genes and genes involved in nitrogen (N) and/or phosphorus (P) limitation stress. Such significantly changed genes were well explained by chosen environmental factors (COD, nitrite-N, nitrate-N, dissolved inorganic phosphorus, chlorophyll-a and algal density). Overall results suggested that this bloom might enhance the microbial converting of nitrate to N(2) and ammonia nitrogen, decrease P removal from seawater, activate the glyoxylate cycle, and reduce infection activity of bacteriophage. This study presents new information on the relationship of algae to other microbes in aquatic systems, and provides new insights into our understanding of ecological impacts of phytoplankton blooms. |
format | Online Article Text |
id | pubmed-5050414 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-50504142016-10-11 A comprehensive insight into functional profiles of free-living microbial community responses to a toxic Akashiwo sanguinea bloom Yang, Caiyun Li, Yi Zhou, Yanyan Lei, Xueqian Zheng, Wei Tian, Yun Van Nostrand, Joy D. He, Zhili Wu, Liyou Zhou, Jizhong Zheng, Tianling Sci Rep Article Phytoplankton blooms are a worldwide problem and can greatly affect ecological processes in aquatic systems, but its impacts on the functional potential of microbial communities are limited. In this study, a high-throughput microarray-based technology (GeoChip) was used to profile the functional potential of free-living microbes from the Xiamen Sea Area in response to a 2011 Akashiwo sanguinea bloom. The bloom altered the overall community functional structure. Genes that were significantly (p < 0.05) increased during the bloom included carbon degradation genes and genes involved in nitrogen (N) and/or phosphorus (P) limitation stress. Such significantly changed genes were well explained by chosen environmental factors (COD, nitrite-N, nitrate-N, dissolved inorganic phosphorus, chlorophyll-a and algal density). Overall results suggested that this bloom might enhance the microbial converting of nitrate to N(2) and ammonia nitrogen, decrease P removal from seawater, activate the glyoxylate cycle, and reduce infection activity of bacteriophage. This study presents new information on the relationship of algae to other microbes in aquatic systems, and provides new insights into our understanding of ecological impacts of phytoplankton blooms. Nature Publishing Group 2016-10-05 /pmc/articles/PMC5050414/ /pubmed/27703234 http://dx.doi.org/10.1038/srep34645 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Yang, Caiyun Li, Yi Zhou, Yanyan Lei, Xueqian Zheng, Wei Tian, Yun Van Nostrand, Joy D. He, Zhili Wu, Liyou Zhou, Jizhong Zheng, Tianling A comprehensive insight into functional profiles of free-living microbial community responses to a toxic Akashiwo sanguinea bloom |
title | A comprehensive insight into functional profiles of free-living microbial community responses to a toxic Akashiwo sanguinea bloom |
title_full | A comprehensive insight into functional profiles of free-living microbial community responses to a toxic Akashiwo sanguinea bloom |
title_fullStr | A comprehensive insight into functional profiles of free-living microbial community responses to a toxic Akashiwo sanguinea bloom |
title_full_unstemmed | A comprehensive insight into functional profiles of free-living microbial community responses to a toxic Akashiwo sanguinea bloom |
title_short | A comprehensive insight into functional profiles of free-living microbial community responses to a toxic Akashiwo sanguinea bloom |
title_sort | comprehensive insight into functional profiles of free-living microbial community responses to a toxic akashiwo sanguinea bloom |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5050414/ https://www.ncbi.nlm.nih.gov/pubmed/27703234 http://dx.doi.org/10.1038/srep34645 |
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