Cargando…
SeqKit: A Cross-Platform and Ultrafast Toolkit for FASTA/Q File Manipulation
FASTA and FASTQ are basic and ubiquitous formats for storing nucleotide and protein sequences. Common manipulations of FASTA/Q file include converting, searching, filtering, deduplication, splitting, shuffling, and sampling. Existing tools only implement some of these manipulations, and not particul...
Autores principales: | Shen, Wei, Le, Shuai, Li, Yan, Hu, Fuquan |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2016
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5051824/ https://www.ncbi.nlm.nih.gov/pubmed/27706213 http://dx.doi.org/10.1371/journal.pone.0163962 |
Ejemplares similares
-
BigSeqKit: a parallel Big Data toolkit to process FASTA and FASTQ files at scale
por: Piñeiro, César, et al.
Publicado: (2023) -
FUSTA: leveraging FUSE for manipulation of multiFASTA files at scale
por: Delehelle, Franklin, et al.
Publicado: (2022) -
FASTAFS: file system virtualisation of random access compressed FASTA files
por: Hoogstrate, Youri, et al.
Publicado: (2021) -
MFCompress: a compression tool for FASTA and multi-FASTA data
por: Pinho, Armando J., et al.
Publicado: (2014) -
FastaValidator: an open-source Java library to parse and validate FASTA formatted sequences
por: Waldmann, Jost, et al.
Publicado: (2014)