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Draft genome sequence of Bradyrhizobium sp. strain BR 3262, an effective microsymbiont recommended for cowpea inoculation in Brazil
The strain BR 3262 was isolated from nodule of cowpea (Vigna unguiculata L. Walp) growing in soil of the Atlantic Forest area in Brazil and it is reported as an efficient nitrogen fixing bacterium associated to cowpea. Firstly, this strain was assigned as Bradyrhizobium elkanii, however, recently a...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5052334/ https://www.ncbi.nlm.nih.gov/pubmed/27216893 http://dx.doi.org/10.1016/j.bjm.2016.03.001 |
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author | Simões-Araújo, Jean Luiz Leite, Jakson Marie Rouws, Luc Felicianus Passos, Samuel Ribeiro Xavier, Gustavo Ribeiro Rumjanek, Norma Gouvêa Zilli, Jerri Édson |
author_facet | Simões-Araújo, Jean Luiz Leite, Jakson Marie Rouws, Luc Felicianus Passos, Samuel Ribeiro Xavier, Gustavo Ribeiro Rumjanek, Norma Gouvêa Zilli, Jerri Édson |
author_sort | Simões-Araújo, Jean Luiz |
collection | PubMed |
description | The strain BR 3262 was isolated from nodule of cowpea (Vigna unguiculata L. Walp) growing in soil of the Atlantic Forest area in Brazil and it is reported as an efficient nitrogen fixing bacterium associated to cowpea. Firstly, this strain was assigned as Bradyrhizobium elkanii, however, recently a more detailed genetic and molecular characterization has indicated it could be a Bradyrhizobium pachyrhizi species. We report here the draft genome sequence of B. pachyrhizi strain BR 3262, an elite bacterium used as inoculant for cowpea. The whole genome with 116 scaffolds, 8,965,178 bp and 63.8% of C+G content for BR 3262 was obtained using Illumina MiSeq sequencing technology. Annotation was added by the RAST prokaryotic genome annotation service and shown 8369 coding sequences, 52 RNAs genes, classified in 504 subsystems. |
format | Online Article Text |
id | pubmed-5052334 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-50523342016-10-12 Draft genome sequence of Bradyrhizobium sp. strain BR 3262, an effective microsymbiont recommended for cowpea inoculation in Brazil Simões-Araújo, Jean Luiz Leite, Jakson Marie Rouws, Luc Felicianus Passos, Samuel Ribeiro Xavier, Gustavo Ribeiro Rumjanek, Norma Gouvêa Zilli, Jerri Édson Braz J Microbiol Short Communication The strain BR 3262 was isolated from nodule of cowpea (Vigna unguiculata L. Walp) growing in soil of the Atlantic Forest area in Brazil and it is reported as an efficient nitrogen fixing bacterium associated to cowpea. Firstly, this strain was assigned as Bradyrhizobium elkanii, however, recently a more detailed genetic and molecular characterization has indicated it could be a Bradyrhizobium pachyrhizi species. We report here the draft genome sequence of B. pachyrhizi strain BR 3262, an elite bacterium used as inoculant for cowpea. The whole genome with 116 scaffolds, 8,965,178 bp and 63.8% of C+G content for BR 3262 was obtained using Illumina MiSeq sequencing technology. Annotation was added by the RAST prokaryotic genome annotation service and shown 8369 coding sequences, 52 RNAs genes, classified in 504 subsystems. Elsevier 2016-04-01 /pmc/articles/PMC5052334/ /pubmed/27216893 http://dx.doi.org/10.1016/j.bjm.2016.03.001 Text en http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Short Communication Simões-Araújo, Jean Luiz Leite, Jakson Marie Rouws, Luc Felicianus Passos, Samuel Ribeiro Xavier, Gustavo Ribeiro Rumjanek, Norma Gouvêa Zilli, Jerri Édson Draft genome sequence of Bradyrhizobium sp. strain BR 3262, an effective microsymbiont recommended for cowpea inoculation in Brazil |
title | Draft genome sequence of Bradyrhizobium sp. strain BR 3262, an effective microsymbiont recommended for cowpea inoculation in Brazil |
title_full | Draft genome sequence of Bradyrhizobium sp. strain BR 3262, an effective microsymbiont recommended for cowpea inoculation in Brazil |
title_fullStr | Draft genome sequence of Bradyrhizobium sp. strain BR 3262, an effective microsymbiont recommended for cowpea inoculation in Brazil |
title_full_unstemmed | Draft genome sequence of Bradyrhizobium sp. strain BR 3262, an effective microsymbiont recommended for cowpea inoculation in Brazil |
title_short | Draft genome sequence of Bradyrhizobium sp. strain BR 3262, an effective microsymbiont recommended for cowpea inoculation in Brazil |
title_sort | draft genome sequence of bradyrhizobium sp. strain br 3262, an effective microsymbiont recommended for cowpea inoculation in brazil |
topic | Short Communication |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5052334/ https://www.ncbi.nlm.nih.gov/pubmed/27216893 http://dx.doi.org/10.1016/j.bjm.2016.03.001 |
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