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Draft genome sequence of Bradyrhizobium sp. strain BR 3262, an effective microsymbiont recommended for cowpea inoculation in Brazil

The strain BR 3262 was isolated from nodule of cowpea (Vigna unguiculata L. Walp) growing in soil of the Atlantic Forest area in Brazil and it is reported as an efficient nitrogen fixing bacterium associated to cowpea. Firstly, this strain was assigned as Bradyrhizobium elkanii, however, recently a...

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Autores principales: Simões-Araújo, Jean Luiz, Leite, Jakson, Marie Rouws, Luc Felicianus, Passos, Samuel Ribeiro, Xavier, Gustavo Ribeiro, Rumjanek, Norma Gouvêa, Zilli, Jerri Édson
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5052334/
https://www.ncbi.nlm.nih.gov/pubmed/27216893
http://dx.doi.org/10.1016/j.bjm.2016.03.001
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author Simões-Araújo, Jean Luiz
Leite, Jakson
Marie Rouws, Luc Felicianus
Passos, Samuel Ribeiro
Xavier, Gustavo Ribeiro
Rumjanek, Norma Gouvêa
Zilli, Jerri Édson
author_facet Simões-Araújo, Jean Luiz
Leite, Jakson
Marie Rouws, Luc Felicianus
Passos, Samuel Ribeiro
Xavier, Gustavo Ribeiro
Rumjanek, Norma Gouvêa
Zilli, Jerri Édson
author_sort Simões-Araújo, Jean Luiz
collection PubMed
description The strain BR 3262 was isolated from nodule of cowpea (Vigna unguiculata L. Walp) growing in soil of the Atlantic Forest area in Brazil and it is reported as an efficient nitrogen fixing bacterium associated to cowpea. Firstly, this strain was assigned as Bradyrhizobium elkanii, however, recently a more detailed genetic and molecular characterization has indicated it could be a Bradyrhizobium pachyrhizi species. We report here the draft genome sequence of B. pachyrhizi strain BR 3262, an elite bacterium used as inoculant for cowpea. The whole genome with 116 scaffolds, 8,965,178 bp and 63.8% of C+G content for BR 3262 was obtained using Illumina MiSeq sequencing technology. Annotation was added by the RAST prokaryotic genome annotation service and shown 8369 coding sequences, 52 RNAs genes, classified in 504 subsystems.
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spelling pubmed-50523342016-10-12 Draft genome sequence of Bradyrhizobium sp. strain BR 3262, an effective microsymbiont recommended for cowpea inoculation in Brazil Simões-Araújo, Jean Luiz Leite, Jakson Marie Rouws, Luc Felicianus Passos, Samuel Ribeiro Xavier, Gustavo Ribeiro Rumjanek, Norma Gouvêa Zilli, Jerri Édson Braz J Microbiol Short Communication The strain BR 3262 was isolated from nodule of cowpea (Vigna unguiculata L. Walp) growing in soil of the Atlantic Forest area in Brazil and it is reported as an efficient nitrogen fixing bacterium associated to cowpea. Firstly, this strain was assigned as Bradyrhizobium elkanii, however, recently a more detailed genetic and molecular characterization has indicated it could be a Bradyrhizobium pachyrhizi species. We report here the draft genome sequence of B. pachyrhizi strain BR 3262, an elite bacterium used as inoculant for cowpea. The whole genome with 116 scaffolds, 8,965,178 bp and 63.8% of C+G content for BR 3262 was obtained using Illumina MiSeq sequencing technology. Annotation was added by the RAST prokaryotic genome annotation service and shown 8369 coding sequences, 52 RNAs genes, classified in 504 subsystems. Elsevier 2016-04-01 /pmc/articles/PMC5052334/ /pubmed/27216893 http://dx.doi.org/10.1016/j.bjm.2016.03.001 Text en http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Short Communication
Simões-Araújo, Jean Luiz
Leite, Jakson
Marie Rouws, Luc Felicianus
Passos, Samuel Ribeiro
Xavier, Gustavo Ribeiro
Rumjanek, Norma Gouvêa
Zilli, Jerri Édson
Draft genome sequence of Bradyrhizobium sp. strain BR 3262, an effective microsymbiont recommended for cowpea inoculation in Brazil
title Draft genome sequence of Bradyrhizobium sp. strain BR 3262, an effective microsymbiont recommended for cowpea inoculation in Brazil
title_full Draft genome sequence of Bradyrhizobium sp. strain BR 3262, an effective microsymbiont recommended for cowpea inoculation in Brazil
title_fullStr Draft genome sequence of Bradyrhizobium sp. strain BR 3262, an effective microsymbiont recommended for cowpea inoculation in Brazil
title_full_unstemmed Draft genome sequence of Bradyrhizobium sp. strain BR 3262, an effective microsymbiont recommended for cowpea inoculation in Brazil
title_short Draft genome sequence of Bradyrhizobium sp. strain BR 3262, an effective microsymbiont recommended for cowpea inoculation in Brazil
title_sort draft genome sequence of bradyrhizobium sp. strain br 3262, an effective microsymbiont recommended for cowpea inoculation in brazil
topic Short Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5052334/
https://www.ncbi.nlm.nih.gov/pubmed/27216893
http://dx.doi.org/10.1016/j.bjm.2016.03.001
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