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In-house quantitative real-time PCR for the diagnosis of hepatitis B virus and hepatitis C virus infections
The quantification of viral nucleic acids in serum by real-time PCR plays an important role in diagnosing hepatitis B virus and hepatitis C virus infection. In this study, we developed an assay using specific primers and probes to quantify hepatitis B virus DNA or hepatitis C virus RNA in serum from...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5052370/ https://www.ncbi.nlm.nih.gov/pubmed/27637170 http://dx.doi.org/10.1016/j.bjm.2016.07.008 |
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author | Zauli, Danielle Alves Gomes Menezes, Carla Lisandre Paula de Oliveira, Cristiane Lommez de Mateo, Elvis Cristian Cueva Ferreira, Alessandro Clayton de Souza |
author_facet | Zauli, Danielle Alves Gomes Menezes, Carla Lisandre Paula de Oliveira, Cristiane Lommez de Mateo, Elvis Cristian Cueva Ferreira, Alessandro Clayton de Souza |
author_sort | Zauli, Danielle Alves Gomes |
collection | PubMed |
description | The quantification of viral nucleic acids in serum by real-time PCR plays an important role in diagnosing hepatitis B virus and hepatitis C virus infection. In this study, we developed an assay using specific primers and probes to quantify hepatitis B virus DNA or hepatitis C virus RNA in serum from infected patients. For standardization and validation of the assay, an international panel of hepatitis B virus/hepatitis C virus and standard plasmids was used. A correlation coefficient of 0.983 and 0.963 for hepatitis B virus and hepatitis C virus, respectively, was obtained based on cycle threshold values and concentrations of DNA or RNA. The standard curve showed a linear relationship from 19 IU/mL to 1.9 × 10(9) IU/mL of serum, with a coefficient of determination (r(2)) of 0.99. In sera from patients infected with hepatitis B virus or hepatitis C virus viral loads (19 IU/mL and 1.9 × 10(9) IU/mL), we quantified viral loads with a detection limit of 1.9 × 10(2) IU/mL. The real-time quantitative PCR assay developed in this study provides an ideal system for routine diagnosis and confirmation of indeterminate serological results, especially in immunosuppressed patients. |
format | Online Article Text |
id | pubmed-5052370 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-50523702016-10-12 In-house quantitative real-time PCR for the diagnosis of hepatitis B virus and hepatitis C virus infections Zauli, Danielle Alves Gomes Menezes, Carla Lisandre Paula de Oliveira, Cristiane Lommez de Mateo, Elvis Cristian Cueva Ferreira, Alessandro Clayton de Souza Braz J Microbiol Genetics and Molecular Microbiology The quantification of viral nucleic acids in serum by real-time PCR plays an important role in diagnosing hepatitis B virus and hepatitis C virus infection. In this study, we developed an assay using specific primers and probes to quantify hepatitis B virus DNA or hepatitis C virus RNA in serum from infected patients. For standardization and validation of the assay, an international panel of hepatitis B virus/hepatitis C virus and standard plasmids was used. A correlation coefficient of 0.983 and 0.963 for hepatitis B virus and hepatitis C virus, respectively, was obtained based on cycle threshold values and concentrations of DNA or RNA. The standard curve showed a linear relationship from 19 IU/mL to 1.9 × 10(9) IU/mL of serum, with a coefficient of determination (r(2)) of 0.99. In sera from patients infected with hepatitis B virus or hepatitis C virus viral loads (19 IU/mL and 1.9 × 10(9) IU/mL), we quantified viral loads with a detection limit of 1.9 × 10(2) IU/mL. The real-time quantitative PCR assay developed in this study provides an ideal system for routine diagnosis and confirmation of indeterminate serological results, especially in immunosuppressed patients. Elsevier 2016-07-27 /pmc/articles/PMC5052370/ /pubmed/27637170 http://dx.doi.org/10.1016/j.bjm.2016.07.008 Text en © 2016 Published by Elsevier Editora Ltda. on behalf of Sociedade Brasileira de Microbiologia. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Genetics and Molecular Microbiology Zauli, Danielle Alves Gomes Menezes, Carla Lisandre Paula de Oliveira, Cristiane Lommez de Mateo, Elvis Cristian Cueva Ferreira, Alessandro Clayton de Souza In-house quantitative real-time PCR for the diagnosis of hepatitis B virus and hepatitis C virus infections |
title | In-house quantitative real-time PCR for the diagnosis of hepatitis B virus and hepatitis C virus infections |
title_full | In-house quantitative real-time PCR for the diagnosis of hepatitis B virus and hepatitis C virus infections |
title_fullStr | In-house quantitative real-time PCR for the diagnosis of hepatitis B virus and hepatitis C virus infections |
title_full_unstemmed | In-house quantitative real-time PCR for the diagnosis of hepatitis B virus and hepatitis C virus infections |
title_short | In-house quantitative real-time PCR for the diagnosis of hepatitis B virus and hepatitis C virus infections |
title_sort | in-house quantitative real-time pcr for the diagnosis of hepatitis b virus and hepatitis c virus infections |
topic | Genetics and Molecular Microbiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5052370/ https://www.ncbi.nlm.nih.gov/pubmed/27637170 http://dx.doi.org/10.1016/j.bjm.2016.07.008 |
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