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In-house quantitative real-time PCR for the diagnosis of hepatitis B virus and hepatitis C virus infections

The quantification of viral nucleic acids in serum by real-time PCR plays an important role in diagnosing hepatitis B virus and hepatitis C virus infection. In this study, we developed an assay using specific primers and probes to quantify hepatitis B virus DNA or hepatitis C virus RNA in serum from...

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Autores principales: Zauli, Danielle Alves Gomes, Menezes, Carla Lisandre Paula de, Oliveira, Cristiane Lommez de, Mateo, Elvis Cristian Cueva, Ferreira, Alessandro Clayton de Souza
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5052370/
https://www.ncbi.nlm.nih.gov/pubmed/27637170
http://dx.doi.org/10.1016/j.bjm.2016.07.008
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author Zauli, Danielle Alves Gomes
Menezes, Carla Lisandre Paula de
Oliveira, Cristiane Lommez de
Mateo, Elvis Cristian Cueva
Ferreira, Alessandro Clayton de Souza
author_facet Zauli, Danielle Alves Gomes
Menezes, Carla Lisandre Paula de
Oliveira, Cristiane Lommez de
Mateo, Elvis Cristian Cueva
Ferreira, Alessandro Clayton de Souza
author_sort Zauli, Danielle Alves Gomes
collection PubMed
description The quantification of viral nucleic acids in serum by real-time PCR plays an important role in diagnosing hepatitis B virus and hepatitis C virus infection. In this study, we developed an assay using specific primers and probes to quantify hepatitis B virus DNA or hepatitis C virus RNA in serum from infected patients. For standardization and validation of the assay, an international panel of hepatitis B virus/hepatitis C virus and standard plasmids was used. A correlation coefficient of 0.983 and 0.963 for hepatitis B virus and hepatitis C virus, respectively, was obtained based on cycle threshold values and concentrations of DNA or RNA. The standard curve showed a linear relationship from 19 IU/mL to 1.9 × 10(9) IU/mL of serum, with a coefficient of determination (r(2)) of 0.99. In sera from patients infected with hepatitis B virus or hepatitis C virus viral loads (19 IU/mL and 1.9 × 10(9) IU/mL), we quantified viral loads with a detection limit of 1.9 × 10(2) IU/mL. The real-time quantitative PCR assay developed in this study provides an ideal system for routine diagnosis and confirmation of indeterminate serological results, especially in immunosuppressed patients.
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spelling pubmed-50523702016-10-12 In-house quantitative real-time PCR for the diagnosis of hepatitis B virus and hepatitis C virus infections Zauli, Danielle Alves Gomes Menezes, Carla Lisandre Paula de Oliveira, Cristiane Lommez de Mateo, Elvis Cristian Cueva Ferreira, Alessandro Clayton de Souza Braz J Microbiol Genetics and Molecular Microbiology The quantification of viral nucleic acids in serum by real-time PCR plays an important role in diagnosing hepatitis B virus and hepatitis C virus infection. In this study, we developed an assay using specific primers and probes to quantify hepatitis B virus DNA or hepatitis C virus RNA in serum from infected patients. For standardization and validation of the assay, an international panel of hepatitis B virus/hepatitis C virus and standard plasmids was used. A correlation coefficient of 0.983 and 0.963 for hepatitis B virus and hepatitis C virus, respectively, was obtained based on cycle threshold values and concentrations of DNA or RNA. The standard curve showed a linear relationship from 19 IU/mL to 1.9 × 10(9) IU/mL of serum, with a coefficient of determination (r(2)) of 0.99. In sera from patients infected with hepatitis B virus or hepatitis C virus viral loads (19 IU/mL and 1.9 × 10(9) IU/mL), we quantified viral loads with a detection limit of 1.9 × 10(2) IU/mL. The real-time quantitative PCR assay developed in this study provides an ideal system for routine diagnosis and confirmation of indeterminate serological results, especially in immunosuppressed patients. Elsevier 2016-07-27 /pmc/articles/PMC5052370/ /pubmed/27637170 http://dx.doi.org/10.1016/j.bjm.2016.07.008 Text en © 2016 Published by Elsevier Editora Ltda. on behalf of Sociedade Brasileira de Microbiologia. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Genetics and Molecular Microbiology
Zauli, Danielle Alves Gomes
Menezes, Carla Lisandre Paula de
Oliveira, Cristiane Lommez de
Mateo, Elvis Cristian Cueva
Ferreira, Alessandro Clayton de Souza
In-house quantitative real-time PCR for the diagnosis of hepatitis B virus and hepatitis C virus infections
title In-house quantitative real-time PCR for the diagnosis of hepatitis B virus and hepatitis C virus infections
title_full In-house quantitative real-time PCR for the diagnosis of hepatitis B virus and hepatitis C virus infections
title_fullStr In-house quantitative real-time PCR for the diagnosis of hepatitis B virus and hepatitis C virus infections
title_full_unstemmed In-house quantitative real-time PCR for the diagnosis of hepatitis B virus and hepatitis C virus infections
title_short In-house quantitative real-time PCR for the diagnosis of hepatitis B virus and hepatitis C virus infections
title_sort in-house quantitative real-time pcr for the diagnosis of hepatitis b virus and hepatitis c virus infections
topic Genetics and Molecular Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5052370/
https://www.ncbi.nlm.nih.gov/pubmed/27637170
http://dx.doi.org/10.1016/j.bjm.2016.07.008
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