High-quality draft genome sequence of Sedimenticola selenatireducens strain AK4OH1(T), a gammaproteobacterium isolated from estuarine sediment

Sedimenticola selenatireducens strain AK4OH1(T) (= DSM 17993(T) = ATCC BAA-1233(T)) is a microaerophilic bacterium isolated from sediment from the Arthur Kill intertidal strait between New Jersey and Staten Island, NY. S. selenatireducens is Gram-negative and belongs to the Gammaproteobacteria. Stra...

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Autores principales: Louie, Tiffany S., Giovannelli, Donato, Yee, Nathan, Narasingarao, Priya, Starovoytov, Valentin, Göker, Markus, Klenk, Hans-Peter, Lang, Elke, Kyrpides, Nikos C., Woyke, Tanja, Bini, Elisabetta, Häggblom, Max M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2016
Materias:
Short Genome Report
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5052931/
https://www.ncbi.nlm.nih.gov/pubmed/27721915
http://dx.doi.org/10.1186/s40793-016-0191-5
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author Louie, Tiffany S.
Giovannelli, Donato
Yee, Nathan
Narasingarao, Priya
Starovoytov, Valentin
Göker, Markus
Klenk, Hans-Peter
Lang, Elke
Kyrpides, Nikos C.
Woyke, Tanja
Bini, Elisabetta
Häggblom, Max M.
author_facet Louie, Tiffany S.
Giovannelli, Donato
Yee, Nathan
Narasingarao, Priya
Starovoytov, Valentin
Göker, Markus
Klenk, Hans-Peter
Lang, Elke
Kyrpides, Nikos C.
Woyke, Tanja
Bini, Elisabetta
Häggblom, Max M.
author_sort Louie, Tiffany S.
collection PubMed
description Sedimenticola selenatireducens strain AK4OH1(T) (= DSM 17993(T) = ATCC BAA-1233(T)) is a microaerophilic bacterium isolated from sediment from the Arthur Kill intertidal strait between New Jersey and Staten Island, NY. S. selenatireducens is Gram-negative and belongs to the Gammaproteobacteria. Strain AK4OH1(T) was the first representative of its genus to be isolated for its unique coupling of the oxidation of aromatic acids to the respiration of selenate. It is a versatile heterotroph and can use a variety of carbon compounds, but can also grow lithoautotrophically under hypoxic and anaerobic conditions. The draft genome comprises 4,588,530 bp and 4276 predicted protein-coding genes including genes for the anaerobic degradation of 4-hydroxybenzoate and benzoate. Here we report the main features of the genome of S. selenatireducens strain AK4OH1(T).
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spelling pubmed-50529312016-10-07 High-quality draft genome sequence of Sedimenticola selenatireducens strain AK4OH1(T), a gammaproteobacterium isolated from estuarine sediment Louie, Tiffany S. Giovannelli, Donato Yee, Nathan Narasingarao, Priya Starovoytov, Valentin Göker, Markus Klenk, Hans-Peter Lang, Elke Kyrpides, Nikos C. Woyke, Tanja Bini, Elisabetta Häggblom, Max M. Stand Genomic Sci Short Genome Report Sedimenticola selenatireducens strain AK4OH1(T) (= DSM 17993(T) = ATCC BAA-1233(T)) is a microaerophilic bacterium isolated from sediment from the Arthur Kill intertidal strait between New Jersey and Staten Island, NY. S. selenatireducens is Gram-negative and belongs to the Gammaproteobacteria. Strain AK4OH1(T) was the first representative of its genus to be isolated for its unique coupling of the oxidation of aromatic acids to the respiration of selenate. It is a versatile heterotroph and can use a variety of carbon compounds, but can also grow lithoautotrophically under hypoxic and anaerobic conditions. The draft genome comprises 4,588,530 bp and 4276 predicted protein-coding genes including genes for the anaerobic degradation of 4-hydroxybenzoate and benzoate. Here we report the main features of the genome of S. selenatireducens strain AK4OH1(T). BioMed Central 2016-09-08 /pmc/articles/PMC5052931/ /pubmed/27721915 http://dx.doi.org/10.1186/s40793-016-0191-5 Text en © The Author(s). 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Short Genome Report
Louie, Tiffany S.
Giovannelli, Donato
Yee, Nathan
Narasingarao, Priya
Starovoytov, Valentin
Göker, Markus
Klenk, Hans-Peter
Lang, Elke
Kyrpides, Nikos C.
Woyke, Tanja
Bini, Elisabetta
Häggblom, Max M.
High-quality draft genome sequence of Sedimenticola selenatireducens strain AK4OH1(T), a gammaproteobacterium isolated from estuarine sediment
title High-quality draft genome sequence of Sedimenticola selenatireducens strain AK4OH1(T), a gammaproteobacterium isolated from estuarine sediment
title_full High-quality draft genome sequence of Sedimenticola selenatireducens strain AK4OH1(T), a gammaproteobacterium isolated from estuarine sediment
title_fullStr High-quality draft genome sequence of Sedimenticola selenatireducens strain AK4OH1(T), a gammaproteobacterium isolated from estuarine sediment
title_full_unstemmed High-quality draft genome sequence of Sedimenticola selenatireducens strain AK4OH1(T), a gammaproteobacterium isolated from estuarine sediment
title_short High-quality draft genome sequence of Sedimenticola selenatireducens strain AK4OH1(T), a gammaproteobacterium isolated from estuarine sediment
title_sort high-quality draft genome sequence of sedimenticola selenatireducens strain ak4oh1(t), a gammaproteobacterium isolated from estuarine sediment
topic Short Genome Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5052931/
https://www.ncbi.nlm.nih.gov/pubmed/27721915
http://dx.doi.org/10.1186/s40793-016-0191-5
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