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Characterization of Mangifera indica cultivars in Thailand based on macroscopic, microscopic, and genetic characters
Thai mango cultivars are classified into six groups plus one miscellaneous group according to germplasm database for mango. Characterization is important for conservation and the development of Thai mango cultivars. This study investigated macroscopic, microscopic leaf characteristics, and genetic r...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Medknow Publications & Media Pvt Ltd
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5052938/ https://www.ncbi.nlm.nih.gov/pubmed/27833891 http://dx.doi.org/10.4103/2231-4040.191419 |
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author | Ganogpichayagrai, Aunyachulee Rungsihirunrat, Kanchana Palanuvej, Chanida Ruangrungsi, Nijsiri |
author_facet | Ganogpichayagrai, Aunyachulee Rungsihirunrat, Kanchana Palanuvej, Chanida Ruangrungsi, Nijsiri |
author_sort | Ganogpichayagrai, Aunyachulee |
collection | PubMed |
description | Thai mango cultivars are classified into six groups plus one miscellaneous group according to germplasm database for mango. Characterization is important for conservation and the development of Thai mango cultivars. This study investigated macroscopic, microscopic leaf characteristics, and genetic relationship among 17 cultivars selected from six groups of mango in Thailand. Selected mango samples were obtained from three different locations in Thailand (n = 57). They were observed for their leaf and fruit macroscopic characteristics. Leaf measurement for the stomatal number, veinlet termination number, and palisade ratio was evaluated under a microscope attached with digital camera. DNA fingerprint was performed using CTAB extraction of DNA and inter-simple sequence repeat (ISSR) amplification. Forty-five primers were screened; then, seven primers that amplified the reproducible band patterns were selected to amplified and generate dendrogram by Unweighted Pair-Group Method with Arithmetic Average. These selected 17 Thai mango cultivars had individually macroscopic characteristics based on fruits and leaves. For microscopic characteristics, the stomatal number, veinlet termination number, and palisade ratio were slightly differentiable. For genetic identification, 78 bands of 190-2660 bps were amplified, of which 82.05% were polymorphic. The genetic relationship among these cultivars was demonstrated and categorized into two main clusters. It was shown that ISSR markers could be useful for Thai mango cultivar identification. |
format | Online Article Text |
id | pubmed-5052938 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Medknow Publications & Media Pvt Ltd |
record_format | MEDLINE/PubMed |
spelling | pubmed-50529382016-11-10 Characterization of Mangifera indica cultivars in Thailand based on macroscopic, microscopic, and genetic characters Ganogpichayagrai, Aunyachulee Rungsihirunrat, Kanchana Palanuvej, Chanida Ruangrungsi, Nijsiri J Adv Pharm Technol Res Original Article Thai mango cultivars are classified into six groups plus one miscellaneous group according to germplasm database for mango. Characterization is important for conservation and the development of Thai mango cultivars. This study investigated macroscopic, microscopic leaf characteristics, and genetic relationship among 17 cultivars selected from six groups of mango in Thailand. Selected mango samples were obtained from three different locations in Thailand (n = 57). They were observed for their leaf and fruit macroscopic characteristics. Leaf measurement for the stomatal number, veinlet termination number, and palisade ratio was evaluated under a microscope attached with digital camera. DNA fingerprint was performed using CTAB extraction of DNA and inter-simple sequence repeat (ISSR) amplification. Forty-five primers were screened; then, seven primers that amplified the reproducible band patterns were selected to amplified and generate dendrogram by Unweighted Pair-Group Method with Arithmetic Average. These selected 17 Thai mango cultivars had individually macroscopic characteristics based on fruits and leaves. For microscopic characteristics, the stomatal number, veinlet termination number, and palisade ratio were slightly differentiable. For genetic identification, 78 bands of 190-2660 bps were amplified, of which 82.05% were polymorphic. The genetic relationship among these cultivars was demonstrated and categorized into two main clusters. It was shown that ISSR markers could be useful for Thai mango cultivar identification. Medknow Publications & Media Pvt Ltd 2016 /pmc/articles/PMC5052938/ /pubmed/27833891 http://dx.doi.org/10.4103/2231-4040.191419 Text en Copyright: © 2016 Journal of Advanced Pharmaceutical Technology & Research http://creativecommons.org/licenses/by-nc-sa/3.0 This is an open access article distributed under the terms of the Creative Commons Attribution-NonCommercial-ShareAlike 3.0 License, which allows others to remix, tweak, and build upon the work non-commercially, as long as the author is credited and the new creations are licensed under the identical terms. |
spellingShingle | Original Article Ganogpichayagrai, Aunyachulee Rungsihirunrat, Kanchana Palanuvej, Chanida Ruangrungsi, Nijsiri Characterization of Mangifera indica cultivars in Thailand based on macroscopic, microscopic, and genetic characters |
title | Characterization of Mangifera indica cultivars in Thailand based on macroscopic, microscopic, and genetic characters |
title_full | Characterization of Mangifera indica cultivars in Thailand based on macroscopic, microscopic, and genetic characters |
title_fullStr | Characterization of Mangifera indica cultivars in Thailand based on macroscopic, microscopic, and genetic characters |
title_full_unstemmed | Characterization of Mangifera indica cultivars in Thailand based on macroscopic, microscopic, and genetic characters |
title_short | Characterization of Mangifera indica cultivars in Thailand based on macroscopic, microscopic, and genetic characters |
title_sort | characterization of mangifera indica cultivars in thailand based on macroscopic, microscopic, and genetic characters |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5052938/ https://www.ncbi.nlm.nih.gov/pubmed/27833891 http://dx.doi.org/10.4103/2231-4040.191419 |
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