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Identification of Tumor Evolution Patterns by Means of Inductive Logic Programming

In considering key events of genomic disorders in the development and progression of cancer, the correlation between genomic instability and carcinogenesis is currently under investigation. In this work, we propose an inductive logic programming approach to the problem of modeling evolution patterns...

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Detalles Bibliográficos
Autores principales: Bevilacqua, Vitoantonio, Chiarappa, Patrizia, Mastronardi, Giuseppe, Menolascina, Filippo, Paradiso, Angelo, Tommasi, Stefania
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2008
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5054107/
https://www.ncbi.nlm.nih.gov/pubmed/18973865
http://dx.doi.org/10.1016/S1672-0229(08)60024-8
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author Bevilacqua, Vitoantonio
Chiarappa, Patrizia
Mastronardi, Giuseppe
Menolascina, Filippo
Paradiso, Angelo
Tommasi, Stefania
author_facet Bevilacqua, Vitoantonio
Chiarappa, Patrizia
Mastronardi, Giuseppe
Menolascina, Filippo
Paradiso, Angelo
Tommasi, Stefania
author_sort Bevilacqua, Vitoantonio
collection PubMed
description In considering key events of genomic disorders in the development and progression of cancer, the correlation between genomic instability and carcinogenesis is currently under investigation. In this work, we propose an inductive logic programming approach to the problem of modeling evolution patterns for breast cancer. Using this approach, it is possible to extract fingerprints of stages of the disease that can be used in order to develop and deliver the most adequate therapies to patients. Furthermore, such a model can help physicians and biologists in the elucidation of molecular dynamics underlying the aberrations-waterfall model behind carcinogenesis. By showing results obtained on a real-world dataset, we try to give some hints about further approach to the knowledge-driven validations of such hypotheses.
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spelling pubmed-50541072016-10-14 Identification of Tumor Evolution Patterns by Means of Inductive Logic Programming Bevilacqua, Vitoantonio Chiarappa, Patrizia Mastronardi, Giuseppe Menolascina, Filippo Paradiso, Angelo Tommasi, Stefania Genomics Proteomics Bioinformatics Method In considering key events of genomic disorders in the development and progression of cancer, the correlation between genomic instability and carcinogenesis is currently under investigation. In this work, we propose an inductive logic programming approach to the problem of modeling evolution patterns for breast cancer. Using this approach, it is possible to extract fingerprints of stages of the disease that can be used in order to develop and deliver the most adequate therapies to patients. Furthermore, such a model can help physicians and biologists in the elucidation of molecular dynamics underlying the aberrations-waterfall model behind carcinogenesis. By showing results obtained on a real-world dataset, we try to give some hints about further approach to the knowledge-driven validations of such hypotheses. Elsevier 2008 2008-10-28 /pmc/articles/PMC5054107/ /pubmed/18973865 http://dx.doi.org/10.1016/S1672-0229(08)60024-8 Text en © 2008 Beijing Institute of Genomics http://creativecommons.org/licenses/by-nc-sa/3.0/ This is an open access article under the CC BY-NC-SA license (http://creativecommons.org/licenses/by-nc-sa/3.0/).
spellingShingle Method
Bevilacqua, Vitoantonio
Chiarappa, Patrizia
Mastronardi, Giuseppe
Menolascina, Filippo
Paradiso, Angelo
Tommasi, Stefania
Identification of Tumor Evolution Patterns by Means of Inductive Logic Programming
title Identification of Tumor Evolution Patterns by Means of Inductive Logic Programming
title_full Identification of Tumor Evolution Patterns by Means of Inductive Logic Programming
title_fullStr Identification of Tumor Evolution Patterns by Means of Inductive Logic Programming
title_full_unstemmed Identification of Tumor Evolution Patterns by Means of Inductive Logic Programming
title_short Identification of Tumor Evolution Patterns by Means of Inductive Logic Programming
title_sort identification of tumor evolution patterns by means of inductive logic programming
topic Method
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5054107/
https://www.ncbi.nlm.nih.gov/pubmed/18973865
http://dx.doi.org/10.1016/S1672-0229(08)60024-8
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