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Combining Limited Multiple Environment Trials Data with Crop Modeling to Identify Widely Adaptable Rice Varieties

Multi-Environment Trials (MET) are conventionally used to evaluate varietal performance prior to national yield trials, but the accuracy of MET is constrained by the number of test environments. A modeling approach was innovated to evaluate varietal performance in a large number of environments usin...

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Autores principales: Li, Tao, Ali, Jauhar, Marcaida, Manuel, Angeles, Olivyn, Franje, Neil Johann, Revilleza, Jastin Edrian, Manalo, Emmali, Redoña, Edilberto, Xu, Jianlong, Li, Zhikang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5056740/
https://www.ncbi.nlm.nih.gov/pubmed/27723774
http://dx.doi.org/10.1371/journal.pone.0164456
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author Li, Tao
Ali, Jauhar
Marcaida, Manuel
Angeles, Olivyn
Franje, Neil Johann
Revilleza, Jastin Edrian
Manalo, Emmali
Redoña, Edilberto
Xu, Jianlong
Li, Zhikang
author_facet Li, Tao
Ali, Jauhar
Marcaida, Manuel
Angeles, Olivyn
Franje, Neil Johann
Revilleza, Jastin Edrian
Manalo, Emmali
Redoña, Edilberto
Xu, Jianlong
Li, Zhikang
author_sort Li, Tao
collection PubMed
description Multi-Environment Trials (MET) are conventionally used to evaluate varietal performance prior to national yield trials, but the accuracy of MET is constrained by the number of test environments. A modeling approach was innovated to evaluate varietal performance in a large number of environments using the rice model ORYZA (v3). Modeled yields representing genotype by environment interactions were used to classify the target population of environments (TPE) and analyze varietal yield and yield stability. Eight Green Super Rice (GSR) and three check varieties were evaluated across 3796 environments and 14 seasons in Southern Asia. Based on drought stress imposed on rainfed rice, environments were classified into nine TPEs. Relative to the check varieties, all GSR varieties performed well except GSR-IR1-5-S14-S2-Y2, with GSR-IR1-1-Y4-Y1, and GSR-IR1-8-S6-S3-Y2 consistently performing better in all TPEs. Varietal evaluation using ORYZA (v3) significantly corresponded to the evaluation based on actual MET data within specific sites, but not with considerably larger environments. ORYZA-based evaluation demonstrated the advantage of GSR varieties in diverse environments. This study substantiated that the modeling approach could be an effective, reliable, and advanced approach to complement MET in the assessment of varietal performance on spatial and temporal scales whenever quality soil and weather information are accessible. With available local weather and soil information, this approach can also be adopted to other rice producing domains or other crops using appropriate crop models.
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spelling pubmed-50567402016-10-27 Combining Limited Multiple Environment Trials Data with Crop Modeling to Identify Widely Adaptable Rice Varieties Li, Tao Ali, Jauhar Marcaida, Manuel Angeles, Olivyn Franje, Neil Johann Revilleza, Jastin Edrian Manalo, Emmali Redoña, Edilberto Xu, Jianlong Li, Zhikang PLoS One Research Article Multi-Environment Trials (MET) are conventionally used to evaluate varietal performance prior to national yield trials, but the accuracy of MET is constrained by the number of test environments. A modeling approach was innovated to evaluate varietal performance in a large number of environments using the rice model ORYZA (v3). Modeled yields representing genotype by environment interactions were used to classify the target population of environments (TPE) and analyze varietal yield and yield stability. Eight Green Super Rice (GSR) and three check varieties were evaluated across 3796 environments and 14 seasons in Southern Asia. Based on drought stress imposed on rainfed rice, environments were classified into nine TPEs. Relative to the check varieties, all GSR varieties performed well except GSR-IR1-5-S14-S2-Y2, with GSR-IR1-1-Y4-Y1, and GSR-IR1-8-S6-S3-Y2 consistently performing better in all TPEs. Varietal evaluation using ORYZA (v3) significantly corresponded to the evaluation based on actual MET data within specific sites, but not with considerably larger environments. ORYZA-based evaluation demonstrated the advantage of GSR varieties in diverse environments. This study substantiated that the modeling approach could be an effective, reliable, and advanced approach to complement MET in the assessment of varietal performance on spatial and temporal scales whenever quality soil and weather information are accessible. With available local weather and soil information, this approach can also be adopted to other rice producing domains or other crops using appropriate crop models. Public Library of Science 2016-10-10 /pmc/articles/PMC5056740/ /pubmed/27723774 http://dx.doi.org/10.1371/journal.pone.0164456 Text en © 2016 Li et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Li, Tao
Ali, Jauhar
Marcaida, Manuel
Angeles, Olivyn
Franje, Neil Johann
Revilleza, Jastin Edrian
Manalo, Emmali
Redoña, Edilberto
Xu, Jianlong
Li, Zhikang
Combining Limited Multiple Environment Trials Data with Crop Modeling to Identify Widely Adaptable Rice Varieties
title Combining Limited Multiple Environment Trials Data with Crop Modeling to Identify Widely Adaptable Rice Varieties
title_full Combining Limited Multiple Environment Trials Data with Crop Modeling to Identify Widely Adaptable Rice Varieties
title_fullStr Combining Limited Multiple Environment Trials Data with Crop Modeling to Identify Widely Adaptable Rice Varieties
title_full_unstemmed Combining Limited Multiple Environment Trials Data with Crop Modeling to Identify Widely Adaptable Rice Varieties
title_short Combining Limited Multiple Environment Trials Data with Crop Modeling to Identify Widely Adaptable Rice Varieties
title_sort combining limited multiple environment trials data with crop modeling to identify widely adaptable rice varieties
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5056740/
https://www.ncbi.nlm.nih.gov/pubmed/27723774
http://dx.doi.org/10.1371/journal.pone.0164456
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