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Genome sequences of six Phytophthora species threatening forest ecosystems

The Phytophthora genus comprises of some of the most destructive plant pathogens and attack a wide range of hosts including economically valuable tree species, both angiosperm and gymnosperm. Many known species of Phytophthora are invasive and have been introduced through nursery and agricultural tr...

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Autores principales: Feau, Nicolas, Taylor, Greg, Dale, Angela L., Dhillon, Braham, Bilodeau, Guillaume J., Birol, Inanç, Jones, Steven J.M., Hamelin, Richard C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5061060/
https://www.ncbi.nlm.nih.gov/pubmed/27752469
http://dx.doi.org/10.1016/j.gdata.2016.09.013
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author Feau, Nicolas
Taylor, Greg
Dale, Angela L.
Dhillon, Braham
Bilodeau, Guillaume J.
Birol, Inanç
Jones, Steven J.M.
Hamelin, Richard C.
author_facet Feau, Nicolas
Taylor, Greg
Dale, Angela L.
Dhillon, Braham
Bilodeau, Guillaume J.
Birol, Inanç
Jones, Steven J.M.
Hamelin, Richard C.
author_sort Feau, Nicolas
collection PubMed
description The Phytophthora genus comprises of some of the most destructive plant pathogens and attack a wide range of hosts including economically valuable tree species, both angiosperm and gymnosperm. Many known species of Phytophthora are invasive and have been introduced through nursery and agricultural trade. As part of a larger project aimed at utilizing genomic data for forest disease diagnostics, pathogen detection and monitoring (The TAIGA project: Tree Aggressors Identification using Genomic Approaches; http://taigaforesthealth.com/), we sequenced the genomes of six important Phytophthora species that are important invasive pathogens of trees and a serious threat to the international trade of forest products. This genomic data was used to develop highly sensitive and specific detection assays and for genome comparisons and to make evolutionary inferences and will be useful to the broader plant and tree health community. These WGS data have been deposited in the International Nucleotide Sequence Database Collaboration (DDBJ/ENA/GenBank) under the accession numbers AUPN01000000, AUVH01000000, AUWJ02000000, AUUF02000000, AWVV02000000 and AWVW02000000.
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spelling pubmed-50610602016-10-17 Genome sequences of six Phytophthora species threatening forest ecosystems Feau, Nicolas Taylor, Greg Dale, Angela L. Dhillon, Braham Bilodeau, Guillaume J. Birol, Inanç Jones, Steven J.M. Hamelin, Richard C. Genom Data Data in Brief The Phytophthora genus comprises of some of the most destructive plant pathogens and attack a wide range of hosts including economically valuable tree species, both angiosperm and gymnosperm. Many known species of Phytophthora are invasive and have been introduced through nursery and agricultural trade. As part of a larger project aimed at utilizing genomic data for forest disease diagnostics, pathogen detection and monitoring (The TAIGA project: Tree Aggressors Identification using Genomic Approaches; http://taigaforesthealth.com/), we sequenced the genomes of six important Phytophthora species that are important invasive pathogens of trees and a serious threat to the international trade of forest products. This genomic data was used to develop highly sensitive and specific detection assays and for genome comparisons and to make evolutionary inferences and will be useful to the broader plant and tree health community. These WGS data have been deposited in the International Nucleotide Sequence Database Collaboration (DDBJ/ENA/GenBank) under the accession numbers AUPN01000000, AUVH01000000, AUWJ02000000, AUUF02000000, AWVV02000000 and AWVW02000000. Elsevier 2016-10-03 /pmc/articles/PMC5061060/ /pubmed/27752469 http://dx.doi.org/10.1016/j.gdata.2016.09.013 Text en Crown Copyright © 2016 Published by Elsevier Inc. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Data in Brief
Feau, Nicolas
Taylor, Greg
Dale, Angela L.
Dhillon, Braham
Bilodeau, Guillaume J.
Birol, Inanç
Jones, Steven J.M.
Hamelin, Richard C.
Genome sequences of six Phytophthora species threatening forest ecosystems
title Genome sequences of six Phytophthora species threatening forest ecosystems
title_full Genome sequences of six Phytophthora species threatening forest ecosystems
title_fullStr Genome sequences of six Phytophthora species threatening forest ecosystems
title_full_unstemmed Genome sequences of six Phytophthora species threatening forest ecosystems
title_short Genome sequences of six Phytophthora species threatening forest ecosystems
title_sort genome sequences of six phytophthora species threatening forest ecosystems
topic Data in Brief
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5061060/
https://www.ncbi.nlm.nih.gov/pubmed/27752469
http://dx.doi.org/10.1016/j.gdata.2016.09.013
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