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Rapid Detection of Necrosis in Breast Cancer with Desorption Electrospray Ionization Mass Spectrometry
Identification of necrosis in tumors is of prognostic value in treatment planning, as necrosis is associated with aggressive forms of cancer and unfavourable outcomes. To facilitate rapid detection of necrosis with Mass Spectrometry (MS), we report the lipid MS profile of necrotic breast cancer with...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5062153/ https://www.ncbi.nlm.nih.gov/pubmed/27734938 http://dx.doi.org/10.1038/srep35374 |
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author | Tata, Alessandra Woolman, Michael Ventura, Manuela Bernards, Nicholas Ganguly, Milan Gribble, Adam Shrestha, Bindesh Bluemke, Emma Ginsberg, Howard J. Vitkin, Alex Zheng, Jinzi Zarrine-Afsar, Arash |
author_facet | Tata, Alessandra Woolman, Michael Ventura, Manuela Bernards, Nicholas Ganguly, Milan Gribble, Adam Shrestha, Bindesh Bluemke, Emma Ginsberg, Howard J. Vitkin, Alex Zheng, Jinzi Zarrine-Afsar, Arash |
author_sort | Tata, Alessandra |
collection | PubMed |
description | Identification of necrosis in tumors is of prognostic value in treatment planning, as necrosis is associated with aggressive forms of cancer and unfavourable outcomes. To facilitate rapid detection of necrosis with Mass Spectrometry (MS), we report the lipid MS profile of necrotic breast cancer with Desorption Electrospray Ionization Mass Spectrometry (DESI-MS) imaging validated with statistical analysis and correlating pathology. This MS profile is characterized by (1) the presence of the ion of m/z 572.48 [Cer(d34:1) + Cl](−) which is a ceramide absent from the viable cancer subregions; (2) the absence of the ion of m/z 391.25 which is present in small abundance only in viable cancer subregions; and (3) a slight increase in the relative intensity of known breast cancer biomarker ions of m/z 281.25 [FA(18:1)-H](−) and 303.23 [FA(20:4)-H](−). Necrosis is accompanied by alterations in the tissue optical depolarization rate, allowing tissue polarimetry to guide DESI-MS analysis for rapid MS profiling or targeted MS imaging. This workflow, in combination with the MS profile of necrosis, may permit rapid characterization of necrotic tumors from tissue slices. Further, necrosis-specific biomarker ions are detected in seconds with single MS scans of necrotic tumor tissue smears, which further accelerates the identification workflow by avoiding tissue sectioning and slide preparation. |
format | Online Article Text |
id | pubmed-5062153 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-50621532016-10-24 Rapid Detection of Necrosis in Breast Cancer with Desorption Electrospray Ionization Mass Spectrometry Tata, Alessandra Woolman, Michael Ventura, Manuela Bernards, Nicholas Ganguly, Milan Gribble, Adam Shrestha, Bindesh Bluemke, Emma Ginsberg, Howard J. Vitkin, Alex Zheng, Jinzi Zarrine-Afsar, Arash Sci Rep Article Identification of necrosis in tumors is of prognostic value in treatment planning, as necrosis is associated with aggressive forms of cancer and unfavourable outcomes. To facilitate rapid detection of necrosis with Mass Spectrometry (MS), we report the lipid MS profile of necrotic breast cancer with Desorption Electrospray Ionization Mass Spectrometry (DESI-MS) imaging validated with statistical analysis and correlating pathology. This MS profile is characterized by (1) the presence of the ion of m/z 572.48 [Cer(d34:1) + Cl](−) which is a ceramide absent from the viable cancer subregions; (2) the absence of the ion of m/z 391.25 which is present in small abundance only in viable cancer subregions; and (3) a slight increase in the relative intensity of known breast cancer biomarker ions of m/z 281.25 [FA(18:1)-H](−) and 303.23 [FA(20:4)-H](−). Necrosis is accompanied by alterations in the tissue optical depolarization rate, allowing tissue polarimetry to guide DESI-MS analysis for rapid MS profiling or targeted MS imaging. This workflow, in combination with the MS profile of necrosis, may permit rapid characterization of necrotic tumors from tissue slices. Further, necrosis-specific biomarker ions are detected in seconds with single MS scans of necrotic tumor tissue smears, which further accelerates the identification workflow by avoiding tissue sectioning and slide preparation. Nature Publishing Group 2016-10-13 /pmc/articles/PMC5062153/ /pubmed/27734938 http://dx.doi.org/10.1038/srep35374 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Tata, Alessandra Woolman, Michael Ventura, Manuela Bernards, Nicholas Ganguly, Milan Gribble, Adam Shrestha, Bindesh Bluemke, Emma Ginsberg, Howard J. Vitkin, Alex Zheng, Jinzi Zarrine-Afsar, Arash Rapid Detection of Necrosis in Breast Cancer with Desorption Electrospray Ionization Mass Spectrometry |
title | Rapid Detection of Necrosis in Breast Cancer with Desorption Electrospray Ionization Mass Spectrometry |
title_full | Rapid Detection of Necrosis in Breast Cancer with Desorption Electrospray Ionization Mass Spectrometry |
title_fullStr | Rapid Detection of Necrosis in Breast Cancer with Desorption Electrospray Ionization Mass Spectrometry |
title_full_unstemmed | Rapid Detection of Necrosis in Breast Cancer with Desorption Electrospray Ionization Mass Spectrometry |
title_short | Rapid Detection of Necrosis in Breast Cancer with Desorption Electrospray Ionization Mass Spectrometry |
title_sort | rapid detection of necrosis in breast cancer with desorption electrospray ionization mass spectrometry |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5062153/ https://www.ncbi.nlm.nih.gov/pubmed/27734938 http://dx.doi.org/10.1038/srep35374 |
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