Cargando…

Complete genome sequence of Methanoculleus bourgensis strain MAB1, the syntrophic partner of mesophilic acetate-oxidising bacteria (SAOB)

Methanoculleus bourgensis strain MAB1 has been identified as the hydrogenotrophic partner of mesophilic acetate-oxidising bacteria, a syntrophic relationship operating close to the thermodynamic equilibrium and of considerable importance in ammonia-rich engineered biogas processes. Methanoculleus bo...

Descripción completa

Detalles Bibliográficos
Autores principales: Manzoor, Shahid, Schnürer, Anna, Bongcam-Rudloff, Erik, Müller, Bettina
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5062929/
https://www.ncbi.nlm.nih.gov/pubmed/27777650
http://dx.doi.org/10.1186/s40793-016-0199-x
_version_ 1782459877652692992
author Manzoor, Shahid
Schnürer, Anna
Bongcam-Rudloff, Erik
Müller, Bettina
author_facet Manzoor, Shahid
Schnürer, Anna
Bongcam-Rudloff, Erik
Müller, Bettina
author_sort Manzoor, Shahid
collection PubMed
description Methanoculleus bourgensis strain MAB1 has been identified as the hydrogenotrophic partner of mesophilic acetate-oxidising bacteria, a syntrophic relationship operating close to the thermodynamic equilibrium and of considerable importance in ammonia-rich engineered biogas processes. Methanoculleus bourgensis strain MAB1 belongs to the order Methanomicrobiales, family Methanomicrobiaceae, within the phylum Euryarchaeota. The genome shows a total size of 2,859,299 bp encoding 3450 predicted protein-encoding genes, of which only 1472 (43 %) have been assigned tentative functions. The genome encodes further 44 tRNA genes and three rRNA genes (5S, 16S and 23S rRNA). This study presents assembling and annotation features as well as genomic traits related to ammonia tolerance and methanogenesis. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s40793-016-0199-x) contains supplementary material, which is available to authorized users.
format Online
Article
Text
id pubmed-5062929
institution National Center for Biotechnology Information
language English
publishDate 2016
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-50629292016-10-24 Complete genome sequence of Methanoculleus bourgensis strain MAB1, the syntrophic partner of mesophilic acetate-oxidising bacteria (SAOB) Manzoor, Shahid Schnürer, Anna Bongcam-Rudloff, Erik Müller, Bettina Stand Genomic Sci Short Genome Report Methanoculleus bourgensis strain MAB1 has been identified as the hydrogenotrophic partner of mesophilic acetate-oxidising bacteria, a syntrophic relationship operating close to the thermodynamic equilibrium and of considerable importance in ammonia-rich engineered biogas processes. Methanoculleus bourgensis strain MAB1 belongs to the order Methanomicrobiales, family Methanomicrobiaceae, within the phylum Euryarchaeota. The genome shows a total size of 2,859,299 bp encoding 3450 predicted protein-encoding genes, of which only 1472 (43 %) have been assigned tentative functions. The genome encodes further 44 tRNA genes and three rRNA genes (5S, 16S and 23S rRNA). This study presents assembling and annotation features as well as genomic traits related to ammonia tolerance and methanogenesis. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s40793-016-0199-x) contains supplementary material, which is available to authorized users. BioMed Central 2016-10-12 /pmc/articles/PMC5062929/ /pubmed/27777650 http://dx.doi.org/10.1186/s40793-016-0199-x Text en © The Author(s). 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Short Genome Report
Manzoor, Shahid
Schnürer, Anna
Bongcam-Rudloff, Erik
Müller, Bettina
Complete genome sequence of Methanoculleus bourgensis strain MAB1, the syntrophic partner of mesophilic acetate-oxidising bacteria (SAOB)
title Complete genome sequence of Methanoculleus bourgensis strain MAB1, the syntrophic partner of mesophilic acetate-oxidising bacteria (SAOB)
title_full Complete genome sequence of Methanoculleus bourgensis strain MAB1, the syntrophic partner of mesophilic acetate-oxidising bacteria (SAOB)
title_fullStr Complete genome sequence of Methanoculleus bourgensis strain MAB1, the syntrophic partner of mesophilic acetate-oxidising bacteria (SAOB)
title_full_unstemmed Complete genome sequence of Methanoculleus bourgensis strain MAB1, the syntrophic partner of mesophilic acetate-oxidising bacteria (SAOB)
title_short Complete genome sequence of Methanoculleus bourgensis strain MAB1, the syntrophic partner of mesophilic acetate-oxidising bacteria (SAOB)
title_sort complete genome sequence of methanoculleus bourgensis strain mab1, the syntrophic partner of mesophilic acetate-oxidising bacteria (saob)
topic Short Genome Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5062929/
https://www.ncbi.nlm.nih.gov/pubmed/27777650
http://dx.doi.org/10.1186/s40793-016-0199-x
work_keys_str_mv AT manzoorshahid completegenomesequenceofmethanoculleusbourgensisstrainmab1thesyntrophicpartnerofmesophilicacetateoxidisingbacteriasaob
AT schnureranna completegenomesequenceofmethanoculleusbourgensisstrainmab1thesyntrophicpartnerofmesophilicacetateoxidisingbacteriasaob
AT bongcamrudlofferik completegenomesequenceofmethanoculleusbourgensisstrainmab1thesyntrophicpartnerofmesophilicacetateoxidisingbacteriasaob
AT mullerbettina completegenomesequenceofmethanoculleusbourgensisstrainmab1thesyntrophicpartnerofmesophilicacetateoxidisingbacteriasaob